RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 SLC5A4Q9NY91 659 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 RLFQ13129 1914 aa12.45□□□□□ -0.42
SCAMP4-208ENST00000489554 SLC27A2O14975 620 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 ORC4O43929 436 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 CYP21A2P08686 494 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 FGRP09769 529 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 FCER1AP12319 257 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 ADORA2AP29274 412 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 CREB3L3Q68CJ9 461 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 RIOX2Q8IUF8 465 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 LRRC47Q8N1G4 583 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 C22orf23Q9BZE7 217 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
SCAMP4-208ENST00000489554 RANBP6O60518 1105 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 PCP11498 1178 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 STAT3P40763 770 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 OLFML2BQ68BL8 750 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 SLFN13Q68D06 897 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 STOX1Q6ZVD7 989 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 REPS2Q8NFH8 660 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 NPLOC4Q8TAT6 608 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 DPF3Q92784 378 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 TEX13BQ9BXU2 312 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 FLRT1Q9NZU1 646 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 OGDHLQ9ULD0 1010 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 SNX14Q9Y5W7 946 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
SCAMP4-208ENST00000489554 MKI67P46013 3256 aaKnown RBP12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 ATP2A1O14983 1001 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 MSCO60682 206 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 ZBED4O75132 1171 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 FDX1P10109 184 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 BMP3P12645 472 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 CCND3P30281 292 aaPredicted RBP12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 KCTD2Q14681 263 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 NECAB2Q7Z6G3 386 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 TBC1D10CQ8IV04 446 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 GMCL1Q96IK5 515 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 MMP19Q99542 508 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
SCAMP4-208ENST00000489554 PARP14Q460N5 1801 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 COBLO75128 1261 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 IGHA2P01877 340 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 CYP2C19P33261 490 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 SLC1A4P43007 532 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 NOVP48745 357 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 NT5C2P49902 561 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 STAT2P52630 851 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 ADCK5Q3MIX3 580 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 FAM160B2Q86V87 743 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 CHURC1Q8WUH1 139 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 RNF41Q9H4P4 317 aaPredicted RBP12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 INCENPQ9NQS7 918 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 TCP11L1Q9NUJ3 509 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 NR2E3Q9Y5X4 410 aa12.41□□□□□ -0.42
SCAMP4-208ENST00000489554 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 OAZ1P54368 228 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 ANAPC15P60006 121 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 HAND2P61296 217 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 AKNAD1Q5T1N1 836 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 LHX8Q68G74 356 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 SNRNP48Q6IEG0 339 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 MFSD6Q6ZSS7 791 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 MAML3Q96JK9 1138 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 DDX20Q9UHI6 824 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 ISY1Q9ULR0 285 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-208ENST00000489554 MYH4Q9Y623 1939 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 H0YGN5 161 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 ZNF213O14771 459 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 EVI5O60447 810 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 NMT2O60551 498 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 PLA2G6O60733 806 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 CYBAP13498 195 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 MCCP23508 829 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 CNGA1P29973 690 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 RCSD1Q6JBY9 416 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 DIS3LQ8TF46 1054 aaKnown RBP12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 C11orf49Q9H6J7 331 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 FBXO40Q9UH90 709 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 CTNNA3Q9UI47 895 aa12.39□□□□□ -0.43
SCAMP4-208ENST00000489554 NEDD4P46934 1319 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms