RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 ISY1Q9ULR0 285 aaKnown RBP12.43□□□□□ -0.42
CHKB-211ENST00000489453 MYO9BQ13459 2157 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 DCDC2CA8MYV0 355 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 ZBED4O75132 1171 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 TAL1P17542 331 aaPredicted RBP12.42□□□□□ -0.42
CHKB-211ENST00000489453 TDO2P48775 406 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 FPGSQ05932 587 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 MSL3Q8N5Y2 521 aaKnown RBP12.42□□□□□ -0.42
CHKB-211ENST00000489453 LENG1Q96BZ8 264 aaPredicted RBP12.42□□□□□ -0.42
CHKB-211ENST00000489453 TSEN34Q9BSV6 310 aaKnown RBP12.42□□□□□ -0.42
CHKB-211ENST00000489453 COL25A1Q9BXS0 654 aaPredicted RBP12.42□□□□□ -0.42
CHKB-211ENST00000489453 SEMA6BQ9H3T3 888 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 SPC25Q9HBM1 224 aa12.42□□□□□ -0.42
CHKB-211ENST00000489453 SYNGAP1Q96PV0 1343 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 KIAA0355O15063 1070 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
CHKB-211ENST00000489453 NDUFB10O96000 172 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 APPP05067 770 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 ZNF865P0CJ78 1059 aaPredicted RBP12.41□□□□□ -0.42
CHKB-211ENST00000489453 FOSL2P15408 326 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 SBK1Q52WX2 424 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
CHKB-211ENST00000489453 ZNF444Q8N0Y2 327 aaPredicted RBP12.41□□□□□ -0.42
CHKB-211ENST00000489453 CPXCR1Q8N123 301 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 PRPF38AQ8NAV1 312 aaKnown RBP12.41□□□□□ -0.42
CHKB-211ENST00000489453 REPS2Q8NFH8 660 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 VTI1AQ96AJ9 217 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 STRBPQ96SI9 672 aaKnown RBP12.41□□□□□ -0.42
CHKB-211ENST00000489453 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
CHKB-211ENST00000489453 MROH7Q68CQ1 1323 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 F5H6K3 240 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 GNAT2P19087 354 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 RASA1P20936 1047 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 ACLYP53396 1101 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 KLRC3Q07444 240 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 LRRFIP1Q32MZ4 808 aaKnown RBP12.4□□□□□ -0.42
CHKB-211ENST00000489453 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 CCDC174Q6PII3 467 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 ANKRD35Q8N283 1001 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 APPBP2Q92624 585 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 CLIP2Q9UDT6 1046 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 FEM1BQ9UK73 627 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
CHKB-211ENST00000489453 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
CHKB-211ENST00000489453 RNF113AO15541 343 aaKnown RBP12.39□□□□□ -0.43
CHKB-211ENST00000489453 ADAMTS4O75173 837 aa12.39□□□□□ -0.43
CHKB-211ENST00000489453 C6orf222P0C671 652 aaPredicted RBP12.39□□□□□ -0.43
CHKB-211ENST00000489453 KCNA10Q16322 511 aa12.39□□□□□ -0.43
CHKB-211ENST00000489453 KBTBD3Q8NAB2 608 aa12.39□□□□□ -0.43
CHKB-211ENST00000489453 PCSK9Q8NBP7 692 aaKnown RBP12.39□□□□□ -0.43
CHKB-211ENST00000489453 GLT1D1Q96MS3 346 aa12.39□□□□□ -0.43
CHKB-211ENST00000489453 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHKB-211ENST00000489453 TTYH1Q9H313 450 aaPredicted RBP12.39□□□□□ -0.43
CHKB-211ENST00000489453 RAVER2Q9HCJ3 691 aaKnown RBP12.39□□□□□ -0.43
CHKB-211ENST00000489453 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
CHKB-211ENST00000489453 GBF1Q92538 1859 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 GSG1L2A8MUP6 293 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 GPAA1O43292 621 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 TTLL1O95922 423 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 PPIGQ13427 754 aaKnown RBP eCLIP12.38□□□□□ -0.433e-8■■□□□ 13.8
CHKB-211ENST00000489453 ACVR2BQ13705 512 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 MAMDC4Q6UXC1 1216 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 NOL8Q76FK4 1167 aaKnown RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 ANKRD33Q7Z3H0 272 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 ZNF467Q7Z7K2 595 aaPredicted RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
CHKB-211ENST00000489453 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 TOX2Q96NM4 488 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 NACAP1Q9BZK3 213 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 HOMER2Q9NSB8 354 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 RIPK3Q9Y572 518 aa12.38□□□□□ -0.43
CHKB-211ENST00000489453 A0A0U1RQG5 324 aaPredicted RBP12.37□□□□□ -0.43
CHKB-211ENST00000489453 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
CHKB-211ENST00000489453 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
CHKB-211ENST00000489453 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 TLR3O15455 904 aaKnown RBP12.37□□□□□ -0.43
CHKB-211ENST00000489453 PRDM1O75626 825 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 SNAI1O95863 264 aaPredicted RBP12.37□□□□□ -0.43
CHKB-211ENST00000489453 TIMP1P01033 207 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 ITGB8P26012 769 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 OAZ1P54368 228 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 EPHB4P54760 987 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 PDE4BQ07343 736 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 SLFN13Q68D06 897 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 GMCL1P1Q8NEA9 526 aa12.37□□□□□ -0.43
CHKB-211ENST00000489453 KLHDC9Q8NEP7 349 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms