RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 MTFR1Q15390 333 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 FAM160B2Q86V87 743 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 DGKHQ86XP1 1220 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 CPXCR1Q8N123 301 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 REPS2Q8NFH8 660 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 USP6NLQ92738 828 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 MROH8Q9H579 483 aa18.51■□□□□ 0.55
LMX1A-204ENST00000489443 SLC25A27O95847 323 aa18.5■□□□□ 0.55
LMX1A-204ENST00000489443 INHAP05111 366 aa18.5■□□□□ 0.55
LMX1A-204ENST00000489443 MAP2K5Q13163 448 aa18.5■□□□□ 0.55
LMX1A-204ENST00000489443 SNRNP48Q6IEG0 339 aaKnown RBP18.5■□□□□ 0.55
LMX1A-204ENST00000489443 CYB5R4Q7L1T6 521 aa18.5■□□□□ 0.55
LMX1A-204ENST00000489443 RALYLQ86SE5 291 aaKnown RBP18.5■□□□□ 0.55
LMX1A-204ENST00000489443 RIOX2Q8IUF8 465 aa18.5■□□□□ 0.55
LMX1A-204ENST00000489443 ENAHQ8N8S7 591 aaPredicted RBP18.5■□□□□ 0.55
LMX1A-204ENST00000489443 GPCPD1Q9NPB8 672 aa18.5■□□□□ 0.55
LMX1A-204ENST00000489443 ZNF214Q9UL59 606 aaPredicted RBP18.5■□□□□ 0.55
LMX1A-204ENST00000489443 TNKSO95271 1327 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 BRCA2P51587 3418 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 ZNFX1Q9P2E3 1918 aaKnown RBP18.49■□□□□ 0.55
LMX1A-204ENST00000489443 POTEFA5A3E0 1075 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 STRNO43815 780 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 XRCC5P13010 732 aaKnown RBP18.49■□□□□ 0.55
LMX1A-204ENST00000489443 CCL5P13501 91 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 GRB14Q14449 540 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 STOX1Q6ZVD7 989 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 NCOA7Q8NI08 942 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 TEX13BQ9BXU2 312 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 KAT14Q9H8E8 782 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 SLC38A10Q9HBR0 1119 aa18.49■□□□□ 0.55
LMX1A-204ENST00000489443 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
LMX1A-204ENST00000489443 FRMPD2Q68DX3 1309 aaPredicted RBP18.49■□□□□ 0.55
LMX1A-204ENST00000489443 PLA2G6O60733 806 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 HMGCRP04035 888 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 ADORA2AP29274 412 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 SLC16A2P36021 539 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 CCL14Q16627 93 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 TTBK2Q6IQ55 1244 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 DPP9Q86TI2 863 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 PNMA1Q8ND90 353 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 TRIB2Q92519 343 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 ANKS1AQ92625 1134 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 APBA2Q99767 749 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 RNF208Q9H0X6 261 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 UNC93B1Q9H1C4 597 aa18.48■□□□□ 0.55
LMX1A-204ENST00000489443 SLC27A2O14975 620 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 FDX1P10109 184 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 PDHBP11177 359 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 FCER1AP12319 257 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 ZKSCAN1P17029 563 aaPredicted RBP18.47■□□□□ 0.55
LMX1A-204ENST00000489443 RGS19P49795 217 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 SNAP25P60880 206 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 TRIM32Q13049 653 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 IFIT1BQ5T764 474 aaKnown RBP18.47■□□□□ 0.55
LMX1A-204ENST00000489443 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 TRMT44Q8IYL2 757 aaKnown RBP18.47■□□□□ 0.55
LMX1A-204ENST00000489443 PRR12Q9ULL5 1215 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 RIPK3Q9Y572 518 aa18.47■□□□□ 0.55
LMX1A-204ENST00000489443 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
LMX1A-204ENST00000489443 IFIT3O14879 490 aaKnown RBP18.46■□□□□ 0.55
LMX1A-204ENST00000489443 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 EN2P19622 333 aaPredicted RBP18.46■□□□□ 0.55
LMX1A-204ENST00000489443 COPB2P35606 906 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 ZNF543Q08ER8 600 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 NECTIN1Q15223 517 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 CCDC174Q6PII3 467 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 CHST3Q7LGC8 479 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 MMP19Q99542 508 aa18.46■□□□□ 0.55
LMX1A-204ENST00000489443 COBLO75128 1261 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 HOXC6P09630 235 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 GOLGA8HP0CJ92 632 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 SNHG28P0DPA3 235 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 OAZ1P54368 228 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 KCTD2Q14681 263 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 SEC23AQ15436 765 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 SYDE2Q5VT97 1194 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 BTNL9Q6UXG8 535 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 ABRAQ8N0Z2 381 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 NPLOC4Q8TAT6 608 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 AGBL1Q96MI9 1066 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
LMX1A-204ENST00000489443 ERICH2A1L162 156 aa18.44■□□□□ 0.54
LMX1A-204ENST00000489443 PRKAR2AP13861 404 aaKnown RBP18.44■□□□□ 0.54
LMX1A-204ENST00000489443 SART3Q15020 963 aaKnown RBP18.44■□□□□ 0.54
LMX1A-204ENST00000489443 RNF20Q5VTR2 975 aa18.44■□□□□ 0.54
LMX1A-204ENST00000489443 MB21D2Q8IYB1 491 aaPredicted RBP18.44■□□□□ 0.54
LMX1A-204ENST00000489443 SLC5A4Q9NY91 659 aa18.44■□□□□ 0.54
LMX1A-204ENST00000489443 FLRT1Q9NZU1 646 aa18.44■□□□□ 0.54
LMX1A-204ENST00000489443 RBBP6Q7Z6E9 1792 aaKnown RBP18.44■□□□□ 0.54
LMX1A-204ENST00000489443 PGK2P07205 417 aa18.43■□□□□ 0.54
LMX1A-204ENST00000489443 GJB1P08034 283 aa18.43■□□□□ 0.54
LMX1A-204ENST00000489443 ANTXR2P58335 489 aa18.43■□□□□ 0.54
LMX1A-204ENST00000489443 MLLT1Q03111 559 aaPredicted RBP18.43■□□□□ 0.54
LMX1A-204ENST00000489443 CACNB2Q08289 660 aaPredicted RBP18.43■□□□□ 0.54
LMX1A-204ENST00000489443 GPATCH4Q5T3I0 446 aaKnown RBP18.43■□□□□ 0.54
LMX1A-204ENST00000489443 MFSD14CQ5VZR4 134 aa18.43■□□□□ 0.54
LMX1A-204ENST00000489443 HMX1Q9NP08 348 aaPredicted RBP18.43■□□□□ 0.54
LMX1A-204ENST00000489443 ZNF236Q9UL36 1845 aa18.43■□□□□ 0.54
LMX1A-204ENST00000489443 ZNF536O15090 1300 aa18.43■□□□□ 0.54
LMX1A-204ENST00000489443 SMCHD1A6NHR9 2005 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms