RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 AKR1A1P14550 325 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 HNRNPUQ00839 825 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 FPGSQ05932 587 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 AMOTL1Q8IY63 956 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 REPS2Q8NFH8 660 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 NUP88Q99567 741 aaPredicted RBP12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 KANSL2Q9H9L4 492 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 GOPCQ9HD26 462 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 CNPY2Q9Y2B0 182 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 DIS3Q9Y2L1 958 aaKnown RBP12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 ROBO3Q96MS0 1386 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 GREB1LQ9C091 1923 aaPredicted RBP12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 NCOR1O75376 2440 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
PTP4A2-206ENST00000489313 ACLYP53396 1101 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 FAAP100Q0VG06 881 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 GRIN2CQ14957 1233 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 SLC4A4Q9Y6R1 1079 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 DNAJB2P25686 324 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 IRX5P78411 483 aaPredicted RBP12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 ANKRD33Q7Z3H0 272 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 USP38Q8NB14 1042 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 STARD7Q9NQZ5 370 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 ZHX1Q9UKY1 873 aaPredicted RBP12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 RIPK3Q9Y572 518 aa12.98□□□□□ -0.33
PTP4A2-206ENST00000489313 MYH4Q9Y623 1939 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 TMEM265A0A087WTH1 108 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 MYADML2A6NDP7 307 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 ATP5JP18859 108 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 SLC4A3P48751 1232 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 KCNA10Q16322 511 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 TOX2Q96NM4 488 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 HAUS7Q99871 368 aa12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 TSEN34Q9BSV6 310 aaKnown RBP12.97□□□□□ -0.33
PTP4A2-206ENST00000489313 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 DCDC2CA8MYV0 355 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 COPB2P35606 906 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 KLHDC9Q8NEP7 349 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 NUP133Q8WUM0 1156 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.96□□□□□ -0.334e-7■□□□□ 9
PTP4A2-206ENST00000489313 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 PUS7LQ9H0K6 701 aaKnown RBP12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 PRDM6Q9NQX0 595 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 FAM184BQ9ULE4 1060 aa12.96□□□□□ -0.33
PTP4A2-206ENST00000489313 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 ADCY6O43306 1168 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 HMMRO75330 724 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 TIMP1P01033 207 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 CCSAPQ6IQ19 270 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 TBX21Q9UL17 535 aa12.95□□□□□ -0.34
PTP4A2-206ENST00000489313 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 MOXD2PA6NHM9 499 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 GRXCR1A8MXD5 290 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 F5H6K3 240 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 RAB11FIP3O75154 756 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 DUSP11O75319 330 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 NDUFB10O96000 172 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 RASA1P20936 1047 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 KLRC3Q07444 240 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 CPXCR1Q8N123 301 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 TIFAQ96CG3 184 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 C6orf222P0C671 652 aaPredicted RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 PBX2P40425 430 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 ACVR2BQ13705 512 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 C16orf59Q7L2K0 433 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 VTI1AQ96AJ9 217 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 RAVER2Q9HCJ3 691 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
PTP4A2-206ENST00000489313 MINDY4BA8MYZ0 360 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 ASGR1P07306 291 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 CSF2RAP15509 400 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 CDK7P50613 346 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 CCDC144BQ3MJ40 725 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 TMEM240Q5SV17 173 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
PTP4A2-206ENST00000489313 KIFC2Q96AC6 838 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms