RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 NBPF6Q5VWK0 638 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 LSRQ86X29 649 aaPredicted RBP6.39□□□□□ -1.39
XRN1-213ENST00000489241 TAB3Q8N5C8 712 aaPredicted RBP6.39□□□□□ -1.39
XRN1-213ENST00000489241 ZSCAN18Q8TBC5 510 aaPredicted RBP6.39□□□□□ -1.39
XRN1-213ENST00000489241 BAHD1Q8TBE0 780 aaPredicted RBP6.39□□□□□ -1.39
XRN1-213ENST00000489241 SHDQ96IW2 340 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 NBPF4Q96M43 638 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 KIF2CQ99661 725 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 DCP1AQ9NPI6 582 aaPredicted RBP6.39□□□□□ -1.39
XRN1-213ENST00000489241 R3HCC1Q9Y3T6 440 aaKnown RBP6.39□□□□□ -1.39
XRN1-213ENST00000489241 PCDHA11Q9Y5I1 949 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 SLC12A7Q9Y666 1083 aa6.39□□□□□ -1.39
XRN1-213ENST00000489241 TNFRSF10CO14798 259 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 LRRN2O75325 713 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 KRT1P04264 644 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 C1QTNF9P0C862 333 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 TNNI3KQ59H18 835 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 ZNF662Q6ZS27 426 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 ANKLE2Q86XL3 938 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 LILRA2Q8N149 483 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 OXR1Q8N573 874 aa6.38□□□□□ -1.39
XRN1-213ENST00000489241 SYTL4Q96C24 671 aaPredicted RBP6.38□□□□□ -1.39
XRN1-213ENST00000489241 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.38□□□□□ -1.39
XRN1-213ENST00000489241 CDK11AQ9UQ88 783 aaPredicted RBP6.38□□□□□ -1.39
XRN1-213ENST00000489241 FITM1A5D6W6 292 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 KLF4O43474 513 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 CFPP27918 469 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 PPP2R5EQ16537 467 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 SDE2Q6IQ49 451 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 ANKS3Q6ZW76 656 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 JAZF1Q86VZ6 243 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 C1QL4Q86Z23 238 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 LRRC56Q8IYG6 542 aaPredicted RBP6.37□□□□□ -1.39
XRN1-213ENST00000489241 NLGN1Q8N2Q7 840 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 DHRS1Q96LJ7 313 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 RNF32Q9H0A6 362 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 SP110Q9HB58 689 aa6.37□□□□□ -1.39
XRN1-213ENST00000489241 SHISA3A0PJX4 238 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 TRHRP34981 398 aaPredicted RBP6.36□□□□□ -1.39
XRN1-213ENST00000489241 CASP7P55210 303 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 NR0B2Q15466 257 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 NFE2L2Q16236 605 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 RUFY4Q6ZNE9 571 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 C19orf47Q8N9M1 422 aaKnown RBP6.36□□□□□ -1.39
XRN1-213ENST00000489241 MKL1Q969V6 931 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 SLC26A8Q96RN1 970 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 PRKAG3Q9UGI9 489 aa6.36□□□□□ -1.39
XRN1-213ENST00000489241 TMEM253P0C7T8 217 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 GLDCP23378 1020 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 RNF4P78317 190 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 TEKQ02763 1124 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 CHRNEQ04844 493 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 DUSP4Q13115 394 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 RAB33AQ14088 237 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 CLEC16AQ2KHT3 1053 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 UNC5AQ6ZN44 842 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 IRF2BP1Q8IU81 584 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 HNRNPLLQ8WVV9 542 aaKnown RBP6.35□□□□□ -1.39
XRN1-213ENST00000489241 SLC6A17Q9H1V8 727 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 C19orf44Q9H6X5 657 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 CWC22Q9HCG8 908 aaKnown RBP6.35□□□□□ -1.39
XRN1-213ENST00000489241 CD320Q9NPF0 282 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 SIRPGQ9P1W8 387 aa6.35□□□□□ -1.39
XRN1-213ENST00000489241 ANKRD62A6NC57 917 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 TCAF2A6NFQ2 919 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 CLEC3AO75596 197 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 EGFLAMQ63HQ2 1017 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 LCNL1Q6ZST4 164 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 ANKS4BQ8N8V4 417 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 VWCEQ96DN2 955 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 MRFAP1L1Q96HT8 127 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 ASCC2Q9H1I8 757 aaPredicted RBP6.34□□□□□ -1.39
XRN1-213ENST00000489241 ACTR10Q9NZ32 417 aa6.34□□□□□ -1.39
XRN1-213ENST00000489241 A0A1W2PQH9 124 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 SMAD7O15105 426 aaKnown RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 UBOX5O94941 541 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 ACRP10323 421 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 POLR2BP30876 1174 aaKnown RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 NMIQ13287 307 aaPredicted RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 KCNA10Q16322 511 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 BBS9Q3SYG4 887 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 TIGD5Q53EQ6 642 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 ATG14Q6ZNE5 492 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 SPPL2CQ8IUH8 684 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 FAM169BQ8N8A8 192 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 ENOX1Q8TC92 643 aaKnown RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 SYTL5Q8TDW5 730 aaPredicted RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 INTS4Q96HW7 963 aaKnown RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 SLC6A18Q96N87 628 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 HDAC8Q9BY41 377 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 TRIM55Q9BYV6 548 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 PHAXQ9H814 394 aaKnown RBP6.33□□□□□ -1.4
XRN1-213ENST00000489241 KCNK12Q9HB15 430 aa6.33□□□□□ -1.4
XRN1-213ENST00000489241 MRPL42Q9Y6G3 142 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms