RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 MYH6P13533 1939 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 GOLGA6L4A6NEF3 574 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 DEXIO95424 95 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 MYSM1Q5VVJ2 828 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 BICD2Q8TD16 824 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 ERO1AQ96HE7 468 aa20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 ZNF215Q9UL58 517 aaPredicted RBP20.7■□□□□ 0.9
POLR2J3-205ENST00000489144 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 ILDR2Q71H61 639 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 NEDD1Q8NHV4 660 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 SCAND2PQ9GZW5 306 aaPredicted RBP20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 VAT1LQ9HCJ6 419 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 HLA-DOAP06340 250 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 DGKHQ86XP1 1220 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 ZNF287Q9HBT7 754 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 CLIP2Q9UDT6 1046 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 MAD2L2Q9UI95 211 aa20.69■□□□□ 0.9
POLR2J3-205ENST00000489144 MYH15Q9Y2K3 1946 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 STK36Q9NRP7 1315 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 GOLGA5Q8TBA6 731 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 GJA3Q9Y6H8 435 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 USP17L5A8MUK1 530 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 PPP1R12AO14974 1030 aaPredicted RBP20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 MARCKSP29966 332 aaPredicted RBP20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 PLA2G4AP47712 749 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 ME1P48163 572 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 FKBP1AP62942 108 aaKnown RBP20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 DLGAP5Q15398 846 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 NBPF9Q3BBW0 867 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 HOMER1Q86YM7 354 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 OGFOD1Q8N543 542 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 JDP2Q8WYK2 163 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 GMLQ99445 158 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 UBA5Q9GZZ9 404 aa20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.68■□□□□ 0.9
POLR2J3-205ENST00000489144 SPDYE2BA6NHP3 402 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 MMP1P03956 469 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 SPDYE6P0CI01 402 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 ELF2Q15723 593 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 EARS2Q5JPH6 523 aaKnown RBP20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 LRCH2Q5VUJ6 765 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 CYTH3O43739 400 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 CALM1P0DP23 149 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 CALM2P0DP24 149 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 CALM3P0DP25 149 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 E2F4Q16254 413 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 MCTP2Q6DN12 878 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 RNF26Q9BY78 433 aaPredicted RBP20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 CFAP45Q9UL16 551 aa20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
POLR2J3-205ENST00000489144 MYH8P13535 1937 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 JAG1P78504 1218 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 SMARCE1Q969G3 411 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 NR1I2O75469 434 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 CLSTN1O94985 981 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 ZNF396Q96N95 335 aaPredicted RBP20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 CSRNP1Q96S65 589 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 GOLPH3LQ9H4A5 285 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 MTMR4Q9NYA4 1195 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 DACT1Q9NYF0 836 aa20.66■□□□□ 0.9
POLR2J3-205ENST00000489144 ASTN2O75129 1339 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 MAP2K2P36507 400 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 RRP1BQ14684 758 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 STK38Q15208 465 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 SPC24Q8NBT2 197 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 TMEM39BQ9GZU3 492 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 MRVI1Q9Y6F6 885 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 V9GYY5 206 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 SIPA1L1O43166 1804 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 H2AFXP16104 143 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 HDLBPQ00341 1268 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 PLCB2Q00722 1185 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 SF3A1Q15459 793 aaKnown RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 FAM212AQ96EL1 285 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 CEP89Q96ST8 783 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 IDI2Q9BXS1 227 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 GPCPD1Q9NPB8 672 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 TCP11L1Q9NUJ3 509 aa20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 ZNF70Q9UC06 446 aaPredicted RBP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.65■□□□□ 0.9
POLR2J3-205ENST00000489144 PRPF3O43395 683 aaKnown RBP20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 PNMA6AP0CW24 399 aaPredicted RBP20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 RCAN1P53805 252 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 GRM4Q14833 912 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 SOGA3Q5TF21 947 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 CEP135Q66GS9 1140 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 CIAPIN1Q6FI81 312 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 MIGA2Q7L4E1 593 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 IQUBQ8NA54 791 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 WASF1Q92558 559 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 CD2APQ9Y5K6 639 aa20.64■□□□□ 0.9
POLR2J3-205ENST00000489144 ANKRD20A12PQ8NF67 263 aa20.64■□□□□ 0.89
POLR2J3-205ENST00000489144 RASGRP4Q8TDF6 673 aa20.64■□□□□ 0.89
POLR2J3-205ENST00000489144 PCDHA7Q9UN72 937 aa20.64■□□□□ 0.89
POLR2J3-205ENST00000489144 ELP1O95163 1332 aa20.64■□□□□ 0.89
POLR2J3-205ENST00000489144 FER1L6Q2WGJ9 1857 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 KLRF2D3W0D1 207 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 WNT7AO00755 349 aa20.63■□□□□ 0.89
POLR2J3-205ENST00000489144 TYW1BQ6NUM6 668 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms