RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HOXC6P09630 235 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 TOP1P11387 765 aaKnown RBP10.75□□□□□ -0.69
HDAC6-232ENST00000489053 MCCP23508 829 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 CYP2C19P33261 490 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 NT5C2P49902 561 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 TRDNQ13061 729 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 OLFML2BQ68BL8 750 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 ANKRD35Q8N283 1001 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 GMCL1Q96IK5 515 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 CNPY2Q9Y2B0 182 aa10.75□□□□□ -0.69
HDAC6-232ENST00000489053 MGAMO43451 1857 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 NMT2O60551 498 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 PGK2P07205 417 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 MAP3K21Q5TCX8 1036 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 POTEEQ6S8J3 1075 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 KIAA1211Q6ZU35 1233 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 KCTD1Q719H9 257 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 DCAF4Q8WV16 495 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 STAG1Q8WVM7 1258 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 PAWRQ96IZ0 340 aaKnown RBP10.74□□□□□ -0.69
HDAC6-232ENST00000489053 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 DSCC1Q9BVC3 393 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 KRT23Q9C075 422 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 C11orf49Q9H6J7 331 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 CNNM2Q9H8M5 875 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 RAVER2Q9HCJ3 691 aaKnown RBP10.74□□□□□ -0.69
HDAC6-232ENST00000489053 INCENPQ9NQS7 918 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 HOMER2Q9NSB8 354 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 RAD50Q92878 1312 aa10.74□□□□□ -0.69
HDAC6-232ENST00000489053 FOXP2O15409 715 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 CCND3P30281 292 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-232ENST00000489053 OAZ1P54368 228 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 CCDC174Q6PII3 467 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 CASC1Q6TDU7 716 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 ARRDC4Q8NCT1 418 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 CHST13Q8NET6 341 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 ACAD9Q9H845 621 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 KAT14Q9H8E8 782 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 SLC38A10Q9HBR0 1119 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 DDX20Q9UHI6 824 aaKnown RBP10.73□□□□□ -0.69
HDAC6-232ENST00000489053 ZNF214Q9UL59 606 aaPredicted RBP10.73□□□□□ -0.69
HDAC6-232ENST00000489053 ADAMTS5Q9UNA0 930 aa10.73□□□□□ -0.69
HDAC6-232ENST00000489053 RBBP6Q7Z6E9 1792 aaKnown RBP10.72□□□□□ -0.69
HDAC6-232ENST00000489053 KBTBD13C9JR72 458 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 DHX16O60231 1041 aaKnown RBP10.72□□□□□ -0.69
HDAC6-232ENST00000489053 KDM4AO75164 1064 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 ALAS1P13196 640 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 PDE4AP27815 886 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 RALYLQ86SE5 291 aaKnown RBP10.72□□□□□ -0.69
HDAC6-232ENST00000489053 TBC1D10CQ8IV04 446 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 NPLOC4Q8TAT6 608 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 TTC14Q96N46 770 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 GPCPD1Q9NPB8 672 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 IL17RBQ9NRM6 502 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 FLRT1Q9NZU1 646 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 PNMA2Q9UL42 364 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 OGDHLQ9ULD0 1010 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 CCPG1Q9ULG6 757 aa10.72□□□□□ -0.69
HDAC6-232ENST00000489053 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-232ENST00000489053 ERICH2A1L162 156 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 H0YGN5 161 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 ATP2A1O14983 1001 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 COBLO75128 1261 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 FGRP09769 529 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 RARBP10826 455 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 GSPT1P15170 499 aaKnown RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 TKFCQ3LXA3 575 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 FRMPD2Q68DX3 1309 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 CENPQQ7L2Z9 268 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 DIS3LQ8TF46 1054 aaKnown RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 TINF2Q9BSI4 451 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 RNF146Q9NTX7 359 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 NRBP1Q9UHY1 535 aa10.71□□□□□ -0.69
HDAC6-232ENST00000489053 ZHX1Q9UKY1 873 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 DIS3Q9Y2L1 958 aaKnown RBP10.71□□□□□ -0.69
HDAC6-232ENST00000489053 PFASO15067 1338 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 NEDD4P46934 1319 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 SEPT4O43236 478 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 PLA2G6O60733 806 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 CYBAP13498 195 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 GPATCH4Q5T3I0 446 aaKnown RBP10.7□□□□□ -0.7
HDAC6-232ENST00000489053 SYDE2Q5VT97 1194 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 ANO1Q5XXA6 986 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 NSMFQ6X4W1 530 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 C7orf61Q8IZ16 206 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 REPS2Q8NFH8 660 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 CCDC136Q96JN2 1154 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 TRERF1Q96PN7 1200 aa10.7□□□□□ -0.7
HDAC6-232ENST00000489053 ZSCAN10Q96SZ4 725 aaPredicted RBP10.7□□□□□ -0.7
HDAC6-232ENST00000489053 MPHOSPH6Q99547 160 aaKnown RBP10.7□□□□□ -0.7
HDAC6-232ENST00000489053 SPC25Q9HBM1 224 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms