RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 TRIM28Q13263 835 aaKnown RBP10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 ITPK1Q13572 414 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 SV2BQ7L1I2 683 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 RNF34Q969K3 372 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 PLVAPQ9BX97 442 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 ADAMTS7Q9UKP4 1686 aa10.37□□□□□ -0.75
TRAPPC12-221ENST00000489032 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 SOX1O00570 391 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 FSCN2O14926 492 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 GYS1P13807 737 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 RFC4P35249 363 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 RASSF7Q02833 373 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 GSTM4Q03013 218 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 HS2ST1Q7LGA3 356 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 DTWD1Q8N5C7 304 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 KLHL23Q8NBE8 558 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 SCARF2Q96GP6 870 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 OSGEPQ9NPF4 335 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 METTL5Q9NRN9 209 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 DLG5Q8TDM6 1919 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 TIAM2Q8IVF5 1701 aa10.36□□□□□ -0.75
TRAPPC12-221ENST00000489032 B3GALT4O96024 378 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 HSPA8P11142 646 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 RLBP1P12271 317 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 TCF3P15923 654 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 CHRNA5P30532 468 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 ZNF423Q2M1K9 1284 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 PRRT3Q5FWE3 981 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 ZNF790Q6PG37 636 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 NOC4LQ9BVI4 516 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
TRAPPC12-221ENST00000489032 LINC00114Q6XXX2 140 aa10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 NECAB3Q96P71 396 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 FMNL2Q96PY5 1086 aa10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 THUMPD2Q9BTF0 503 aaKnown RBP10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 TEX13AQ9BXU3 409 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 SOX17Q9H6I2 414 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 LAS1LQ9Y4W2 734 aaKnown RBP10.34□□□□□ -0.75
TRAPPC12-221ENST00000489032 HOXB4P17483 251 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 MAP2K1Q02750 393 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 FAAP100Q0VG06 881 aa10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 COL9A3Q14050 684 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 RELL1Q8IUW5 271 aa10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 TRIM11Q96F44 468 aa10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 GGT7Q9UJ14 662 aa10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
TRAPPC12-221ENST00000489032 A0A0A0MRY4 1105 aa10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 STARD3NLO95772 234 aa10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 CYP11A1P05108 521 aa10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 HNRNPUQ00839 825 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 PWP1Q13610 501 aa10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 SUZ12Q15022 739 aaKnown RBP10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 EMILIN2Q9BXX0 1053 aa10.32□□□□□ -0.76
TRAPPC12-221ENST00000489032 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 RPS6KA4O75676 772 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 SNRPA1P09661 255 aaKnown RBP10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 GNAI1P63096 354 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 AP3B2Q13367 1082 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 SETDB1Q15047 1291 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 MAP3K11Q16584 847 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 ZNF496Q96IT1 587 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 CORO1BQ9BR76 489 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 CBX8Q9HC52 389 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 IFT57Q9NWB7 429 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 MIS18AQ9NYP9 233 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 TNRC18O15417 2968 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 PASKQ96RG2 1323 aa10.31□□□□□ -0.76
TRAPPC12-221ENST00000489032 KCNQ3O43525 872 aa10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 LORP23490 312 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 CD68P34810 354 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 FANCCQ00597 558 aa10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 FBXO11Q86XK2 927 aa10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 DNAJC10Q8IXB1 793 aa10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 FMR1NBQ8N0W7 255 aaPredicted RBP10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 KLHDC7BQ96G42 594 aa10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 CNTNAP4Q9C0A0 1308 aa10.3□□□□□ -0.76
TRAPPC12-221ENST00000489032 ZNF831Q5JPB2 1677 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 ENC1O14682 589 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 CELA3AP09093 270 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 NME2P22392 152 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 NLRP12P59046 1061 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 DDR1Q08345 913 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 LRRC14Q15048 493 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 DEFB115Q30KQ5 88 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 LDHDQ86WU2 507 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 WDR63Q8IWG1 891 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 SULF2Q8IWU5 870 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 IL16Q14005 1332 aa10.29□□□□□ -0.76
TRAPPC12-221ENST00000489032 COL5A3P25940 1745 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 IQCA1LA6NCM1 817 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 RASSF10A6NK89 507 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 CHL1O00533 1208 aa10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 EIF4A1P60842 406 aaKnown RBP10.28□□□□□ -0.76
TRAPPC12-221ENST00000489032 POU4F3Q15319 338 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms