RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 PCDHB12Q9Y5F1 795 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 CFTRP13569 1480 aa4.23□□□□□ -1.73
CALD1-221ENST00000489019 PRDM2Q13029 1718 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 LRRC10BA6NIK2 292 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 NOTOA8MTQ0 251 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 TP53P04637 393 aaPredicted RBP4.22□□□□□ -1.73
CALD1-221ENST00000489019 SYPP08247 313 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 NASPP49321 788 aaPredicted RBP4.22□□□□□ -1.73
CALD1-221ENST00000489019 EIF6P56537 245 aaKnown RBP4.22□□□□□ -1.73
CALD1-221ENST00000489019 MESP2Q0VG99 397 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 MLANAQ16655 118 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 TMEM67Q5HYA8 995 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 RNF111Q6ZNA4 994 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 PRR23BQ6ZRT6 265 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 CCDC144CPQ8IYA2 1237 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 C7orf61Q8IZ16 206 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 LINC00116Q8NCU8 138 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 ABHD4Q8TB40 342 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 DHRS1Q96LJ7 313 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 SRRTQ9BXP5 876 aaKnown RBP4.22□□□□□ -1.73
CALD1-221ENST00000489019 RNF32Q9H0A6 362 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 CHST7Q9NS84 486 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 FBXL21Q9UKT6 434 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 ZNF214Q9UL59 606 aaPredicted RBP4.22□□□□□ -1.73
CALD1-221ENST00000489019 CADPSQ9ULU8 1353 aa4.22□□□□□ -1.73
CALD1-221ENST00000489019 CLIP1P30622 1438 aa4.21□□□□□ -1.73
CALD1-221ENST00000489019 CUX1P39880 1505 aa4.21□□□□□ -1.73
CALD1-221ENST00000489019 A0A1W2PQH9 124 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 PSPNO60542 156 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 FKTNO75072 461 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 C8AP07357 584 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 RAC2P15153 192 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 RPL10P27635 214 aaKnown RBP4.21□□□□□ -1.74
CALD1-221ENST00000489019 PCBP3P57721 371 aaKnown RBP4.21□□□□□ -1.74
CALD1-221ENST00000489019 NR0B2Q15466 257 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 CRTC3Q6UUV7 619 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 WAPLQ7Z5K2 1190 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 FAM169BQ8N8A8 192 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 CCSER2Q9H7U1 834 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 KCNK12Q9HB15 430 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 PCDHB10Q9UN67 800 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 INPP5FQ9Y2H2 1132 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 ZNF451Q9Y4E5 1061 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 KIF27Q86VH2 1401 aa4.21□□□□□ -1.74
CALD1-221ENST00000489019 RAPGEF2Q9Y4G8 1499 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 FITM1A5D6W6 292 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 CBFA2T2O43439 604 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 USP2O75604 605 aaPredicted RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 TCF3P15923 654 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 ATF4P18848 351 aaPredicted RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 CD247P20963 164 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 ERCC5P28715 1186 aaPredicted RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 CEBPAP49715 358 aaPredicted RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 RBM25P49756 843 aaKnown RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 GALK1P51570 392 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 ZNF445P59923 1031 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 DUSP4Q13115 394 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 ANKRD39Q53RE8 183 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 MPZL3Q6UWV2 235 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 KRTAP1-3Q8IUG1 177 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 OXR1Q8N573 874 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 ANKS4BQ8N8V4 417 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 DHX38Q92620 1227 aaKnown RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 SMARCC1Q92922 1105 aaPredicted RBP4.2□□□□□ -1.74
CALD1-221ENST00000489019 BRF1Q92994 677 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 SHISA4Q96DD7 197 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 SEC16BQ96JE7 1060 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 CRBNQ96SW2 442 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 GP6Q9HCN6 339 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 PRR13Q9NZ81 148 aa4.2□□□□□ -1.74
CALD1-221ENST00000489019 H0Y8X5 98 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 FARP2O94887 1054 aaPredicted RBP4.19□□□□□ -1.74
CALD1-221ENST00000489019 ZNF205O95201 554 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 VAV1P15498 845 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 BMP8BP34820 402 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 ZNF124Q15973 351 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 RTP2Q5QGT7 225 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 LILRA2Q8N149 483 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 C19orf47Q8N9M1 422 aaKnown RBP4.19□□□□□ -1.74
CALD1-221ENST00000489019 KLHL6Q8WZ60 621 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 SYTL4Q96C24 671 aaPredicted RBP4.19□□□□□ -1.74
CALD1-221ENST00000489019 MAP6Q96JE9 813 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 HHIPL1Q96JK4 782 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 DIRC2Q96SL1 478 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 DSCC1Q9BVC3 393 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 AP5S1Q9NUS5 200 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 ERVK13-1Q9NX77 482 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 FAM53CQ9NYF3 392 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 ZMYM5Q9UJ78 669 aa4.19□□□□□ -1.74
CALD1-221ENST00000489019 CUX2O14529 1486 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 FANCD2Q9BXW9 1451 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 ERICH3Q5RHP9 1530 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 SSU72P8A0A1W2PR75 194 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 CHRNEQ04844 493 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 GNPTABQ3T906 1256 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 SPPL2CQ8IUH8 684 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 OR6P1Q8NGX9 317 aa4.18□□□□□ -1.74
CALD1-221ENST00000489019 CPLX3Q8WVH0 158 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms