RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 MSL3Q8N5Y2 521 aaKnown RBP12.94□□□□□ -0.34
YIPF3-207ENST00000488966 USP38Q8NB14 1042 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 NUP133Q8WUM0 1156 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 TEX13BQ9BXU2 312 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 ZBTB40Q9NUA8 1239 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 ZHX1Q9UKY1 873 aaPredicted RBP12.94□□□□□ -0.34
YIPF3-207ENST00000488966 FAM184BQ9ULE4 1060 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 VCANP13611 3396 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
YIPF3-207ENST00000488966 SYNGAP1Q96PV0 1343 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
YIPF3-207ENST00000488966 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
YIPF3-207ENST00000488966 MOXD2PA6NHM9 499 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 F5H6K3 240 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 NDUFB10O96000 172 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 RASA1P20936 1047 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 KLRC3Q07444 240 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 STK11IPQ8N1F8 1099 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 TBX21Q9UL17 535 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 COG6Q9Y2V7 657 aa12.93□□□□□ -0.34
YIPF3-207ENST00000488966 ADCY6O43306 1168 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 DUSP11O75319 330 aaKnown RBP12.92□□□□□ -0.34
YIPF3-207ENST00000488966 TIMP1P01033 207 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 C16orf59Q7L2K0 433 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 CPXCR1Q8N123 301 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 FGD4Q96M96 766 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 STRBPQ96SI9 672 aaKnown RBP12.92□□□□□ -0.34
YIPF3-207ENST00000488966 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.92□□□□□ -0.34
YIPF3-207ENST00000488966 CDH23Q9H251 3354 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 ZNF576Q9H609 170 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 NYAP2Q9P242 653 aa12.92□□□□□ -0.34
YIPF3-207ENST00000488966 ARPP21Q9UBL0 812 aaPredicted RBP12.92□□□□□ -0.34
YIPF3-207ENST00000488966 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 GRXCR1A8MXD5 290 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
YIPF3-207ENST00000488966 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
YIPF3-207ENST00000488966 CDK7P50613 346 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 ACVR2BQ13705 512 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 SBK1Q52WX2 424 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
YIPF3-207ENST00000488966 PRPF38AQ8NAV1 312 aaKnown RBP12.91□□□□□ -0.34
YIPF3-207ENST00000488966 TIFAQ96CG3 184 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 GLT1D1Q96MS3 346 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 MKNK2Q9HBH9 465 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
YIPF3-207ENST00000488966 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
YIPF3-207ENST00000488966 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
YIPF3-207ENST00000488966 ELP1O95163 1332 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 PARP14Q460N5 1801 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 IGKV6D-41A0A0C4DH26 115 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 ZBED4O75132 1171 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 ASGR1P07306 291 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 MS4A1P11836 297 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 PBX2P40425 430 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 CCDC144BQ3MJ40 725 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 TMEM240Q5SV17 173 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
YIPF3-207ENST00000488966 KIFC2Q96AC6 838 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 UPF3AQ9H1J1 476 aaKnown RBP12.9□□□□□ -0.34
YIPF3-207ENST00000488966 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
YIPF3-207ENST00000488966 BAZ2AQ9UIF9 1905 aaKnown RBP12.9□□□□□ -0.35
YIPF3-207ENST00000488966 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 CTAGE5O15320 804 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 SMARCA5O60264 1052 aaPredicted RBP12.89□□□□□ -0.35
YIPF3-207ENST00000488966 ACRP10323 421 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 CSF2RAP15509 400 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 GJA9P57773 515 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 PPIGQ13427 754 aaKnown RBP eCLIP12.89□□□□□ -0.35
YIPF3-207ENST00000488966 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 RASIP1Q5U651 963 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
YIPF3-207ENST00000488966 ANKRD35Q8N283 1001 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
YIPF3-207ENST00000488966 OSBP2Q969R2 916 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 CEP95Q96GE4 821 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 PBX4Q9BYU1 374 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 PPP1R12CQ9BZL4 782 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 KATNBL1Q9H079 304 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 ABHD16BQ9H3Z7 469 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 SPC25Q9HBM1 224 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 SLC38A10Q9HBR0 1119 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
YIPF3-207ENST00000488966 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
YIPF3-207ENST00000488966 PRUNE2Q8WUY3 3088 aa12.89□□□□□ -0.35
YIPF3-207ENST00000488966 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
YIPF3-207ENST00000488966 SPTBN5Q9NRC6 3674 aaKnown RBP12.88□□□□□ -0.35
YIPF3-207ENST00000488966 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
YIPF3-207ENST00000488966 ARVCFO00192 962 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms