RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 STXBP3O00186 592 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 GADD45BO75293 160 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-211ENST00000488912 BMP3P12645 472 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-211ENST00000488912 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 SPATA32Q96LK8 384 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 SCAND2PQ9GZW5 306 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-211ENST00000488912 SH3GLB2Q9NR46 395 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 GINM1Q9NU53 330 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 KRT2P35908 639 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 NLRP5P59047 1200 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 PRKG1Q13976 671 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 SCYL3Q8IZE3 742 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 ZC3H15Q8WU90 426 aaKnown RBP12.57□□□□□ -0.4
COL21A1-211ENST00000488912 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-211ENST00000488912 ZNF396Q96N95 335 aaPredicted RBP12.57□□□□□ -0.4
COL21A1-211ENST00000488912 FEZ1Q99689 392 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
COL21A1-211ENST00000488912 ADAMTS3O15072 1205 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 ATL3Q6DD88 541 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 GPT2Q8TD30 523 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 DDX49Q9Y6V7 483 aaKnown RBP12.56□□□□□ -0.4
COL21A1-211ENST00000488912 ELP1O95163 1332 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 CSPP1Q1MSJ5 1256 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 CCDC148Q8NFR7 591 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 MTMR8Q96EF0 704 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 BRMS1Q9HCU9 246 aa12.56□□□□□ -0.4
COL21A1-211ENST00000488912 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 PPP1R11O60927 126 aaPredicted RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 NAPAP54920 295 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 IKQ13123 557 aaPredicted RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 SKOR2Q2VWA4 1001 aaPredicted RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 EARS2Q5JPH6 523 aaKnown RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 TNFRSF25Q93038 417 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 CLIC4Q9Y696 253 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 ZBTB5O15062 677 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 USP2O75604 605 aaPredicted RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 PTPRAP18433 802 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 CALML3P27482 149 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 KLHL40Q2TBA0 621 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 PNMA8AQ86V59 439 aaPredicted RBP12.55□□□□□ -0.4
COL21A1-211ENST00000488912 PICK1Q9NRD5 415 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 RTEL1Q9NZ71 1219 aa12.55□□□□□ -0.4
COL21A1-211ENST00000488912 SMCHD1A6NHR9 2005 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 hCG_1984214I3L0E3 225 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 POTEJP0CG39 1038 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 STAT2P52630 851 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 UBE2HP62256 183 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 DGKZQ13574 1117 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 MTMR2Q13614 643 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 CDC37Q16543 378 aaPredicted RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 ZNF713Q8N859 430 aaPredicted RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 COA7Q96BR5 231 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 ZMYND12Q9H0C1 365 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 PCDHA4Q9UN74 947 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 TOB1P50616 345 aaPredicted RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 ANO1Q5XXA6 986 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 BLIDQ8IZY5 108 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 DAGLBQ8NCG7 672 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 CCDC12Q8WUD4 166 aaPredicted RBP12.54□□□□□ -0.4
COL21A1-211ENST00000488912 RCOR1Q9UKL0 485 aa12.54□□□□□ -0.4
COL21A1-211ENST00000488912 PTPRFP10586 1907 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 M0R2N6 131 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 SNAP25P60880 206 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 SPP2Q13103 211 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
COL21A1-211ENST00000488912 LINC00301Q8NCQ3 95 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 WDR18Q9BV38 432 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 PRR12Q9ULL5 1215 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 SMCO2A6NFE2 343 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 PPP1R12BO60237 982 aaPredicted RBP12.53□□□□□ -0.4
COL21A1-211ENST00000488912 MBD3O95983 291 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 VGLL4Q14135 290 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 SF3A1Q15459 793 aaKnown RBP12.53□□□□□ -0.4
COL21A1-211ENST00000488912 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 LPAR1Q92633 364 aa12.53□□□□□ -0.4
COL21A1-211ENST00000488912 PGBD1Q96JS3 809 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms