RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 TFAP4Q01664 338 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 SNX17Q15036 470 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 Q7L0L9 218 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
TRIM50-203ENST00000488217 NAV1Q8NEY1 1877 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 DNAJC25-GNG10A0A024R161 153 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 SNAI1O95863 264 aaPredicted RBP18.23■□□□□ 0.51
TRIM50-203ENST00000488217 PGK1P00558 417 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 TRIM60Q495X7 471 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 NAPBQ9H115 298 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 RAVER2Q9HCJ3 691 aaKnown RBP18.23■□□□□ 0.51
TRIM50-203ENST00000488217 MTMR10Q9NXD2 777 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 PHF24Q9UPV7 400 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 COL6A3P12111 3177 aa18.23■□□□□ 0.51
TRIM50-203ENST00000488217 POTEB2H3BUK9 544 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 BMP3P12645 472 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 AKR1A1P14550 325 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 MX1P20591 662 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 TLE2Q04725 743 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 PPARAQ07869 468 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 ANKRD45Q5TZF3 282 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 PRDM5Q9NQX1 630 aaPredicted RBP18.22■□□□□ 0.51
TRIM50-203ENST00000488217 FAM184BQ9ULE4 1060 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 TACC3Q9Y6A5 838 aa18.22■□□□□ 0.51
TRIM50-203ENST00000488217 A0A0C4DFX4 3053 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 FDX1P10109 184 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 OAZ1P54368 228 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 ZNF467Q7Z7K2 595 aaPredicted RBP18.21■□□□□ 0.51
TRIM50-203ENST00000488217 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
TRIM50-203ENST00000488217 ANKRD35Q8N283 1001 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 CHST13Q8NET6 341 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 BADQ92934 168 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 TSEN34Q9BSV6 310 aaKnown RBP18.21■□□□□ 0.51
TRIM50-203ENST00000488217 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
TRIM50-203ENST00000488217 FBXO40Q9UH90 709 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 STXBP5LQ9Y2K9 1186 aa18.21■□□□□ 0.51
TRIM50-203ENST00000488217 RLFQ13129 1914 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 ALPK3Q96L96 1907 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 SHHQ15465 462 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 FAM109BQ6ICB4 259 aaPredicted RBP18.2■□□□□ 0.5
TRIM50-203ENST00000488217 SH3RF1Q7Z6J0 888 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
TRIM50-203ENST00000488217 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
TRIM50-203ENST00000488217 MCCP23508 829 aa18.19■□□□□ 0.5
TRIM50-203ENST00000488217 ACVR2BQ13705 512 aa18.19■□□□□ 0.5
TRIM50-203ENST00000488217 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
TRIM50-203ENST00000488217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRIM50-203ENST00000488217 STAG1Q8WVM7 1258 aa18.19■□□□□ 0.5
TRIM50-203ENST00000488217 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
TRIM50-203ENST00000488217 PDLIM7Q9NR12 457 aa18.19■□□□□ 0.5
TRIM50-203ENST00000488217 ADAMTS4O75173 837 aa18.18■□□□□ 0.5
TRIM50-203ENST00000488217 DUSP11O75319 330 aaKnown RBP18.18■□□□□ 0.5
TRIM50-203ENST00000488217 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
TRIM50-203ENST00000488217 KLHDC9Q8NEP7 349 aa18.18■□□□□ 0.5
TRIM50-203ENST00000488217 EVI5LQ96CN4 794 aa18.18■□□□□ 0.5
TRIM50-203ENST00000488217 GMCL1Q96IK5 515 aa18.18■□□□□ 0.5
TRIM50-203ENST00000488217 ABHD16BQ9H3Z7 469 aa18.18■□□□□ 0.5
TRIM50-203ENST00000488217 LAMA2P24043 3122 aaKnown RBP18.18■□□□□ 0.5
TRIM50-203ENST00000488217 A0A1W2PQ45 241 aaPredicted RBP18.17■□□□□ 0.5
TRIM50-203ENST00000488217 A0A1W2PQY0 241 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 PLA2G6O60733 806 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 SLC1A4P43007 532 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 ACLYP53396 1101 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
TRIM50-203ENST00000488217 CTDSPL2Q05D32 466 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 KCNA10Q16322 511 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 FAM160B2Q86V87 743 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 NUP133Q8WUM0 1156 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 LENG1Q96BZ8 264 aaPredicted RBP18.17■□□□□ 0.5
TRIM50-203ENST00000488217 TOX2Q96NM4 488 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 IL17RBQ9NRM6 502 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.17■□□□□ 0.5
TRIM50-203ENST00000488217 ZHX1Q9UKY1 873 aaPredicted RBP18.17■□□□□ 0.5
TRIM50-203ENST00000488217 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 BAZ2AQ9UIF9 1905 aaKnown RBP18.17■□□□□ 0.5
TRIM50-203ENST00000488217 SALL3Q9BXA9 1300 aa18.17■□□□□ 0.5
TRIM50-203ENST00000488217 TSPY2A6NKD2 308 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 DLL1O00548 723 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 KIAA0355O15063 1070 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 FOXP2O15409 715 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 CLTBP09497 229 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 STAT2P52630 851 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 CCSAPQ6IQ19 270 aaPredicted RBP18.16■□□□□ 0.5
TRIM50-203ENST00000488217 CHMP4CQ96CF2 233 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 AGBL1Q96MI9 1066 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 HELLSQ9NRZ9 838 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 TMEM39AQ9NV64 488 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 ANAPC4Q9UJX5 808 aa18.16■□□□□ 0.5
TRIM50-203ENST00000488217 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms