RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 ERICH2A1L162 156 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 TROAPQ12815 778 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 KRT32Q14532 448 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 SYDE2Q5VT97 1194 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 Q6ZUG5 572 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 PRPF38AQ8NAV1 312 aaKnown RBP20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 SPATC1LQ9H0A9 340 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 MAD2L2Q9UI95 211 aa20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 ZNF214Q9UL59 606 aaPredicted RBP20.07■□□□□ 0.8
SHROOM1-205ENST00000488072 PARP14Q460N5 1801 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 ZNF536O15090 1300 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 STAT2P52630 851 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 PRKCZQ05513 592 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 WDR78Q5VTH9 848 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 BLOC1S2Q6QNY1 142 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 NFXL1Q6ZNB6 911 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 CTU1Q7Z7A3 348 aaKnown RBP20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 CMTR1Q8N1G2 835 aaKnown RBP20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 TMEM87BQ96K49 555 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 AGBL1Q96MI9 1066 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 MCOLN1Q9GZU1 580 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 SLC38A10Q9HBR0 1119 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 ZSWIM6Q9HCJ5 1215 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 VAT1LQ9HCJ6 419 aa20.06■□□□□ 0.8
SHROOM1-205ENST00000488072 EPB41L2O43491 1005 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 ERCC3P19447 782 aa20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 NT5C2P49902 561 aa20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 APOBRQ0VD83 1088 aa20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 GRM4Q14833 912 aa20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 SART3Q15020 963 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 BTNL9Q6UXG8 535 aa20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 A0A0G2JMZ2 1700 aa20.05■□□□□ 0.8
SHROOM1-205ENST00000488072 MYPNQ86TC9 1320 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 PALM3A6NDB9 673 aaPredicted RBP20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 TNPO2O14787 897 aaKnown RBP20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 DTNBO60941 627 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 PARP1P09874 1014 aaKnown RBP20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 STAT3P40763 770 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 FCGRTP55899 365 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 FAM160B2Q86V87 743 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 NCAPG2Q86XI2 1143 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 CHURC1Q8WUH1 139 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 PIBF1Q8WXW3 757 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 BRF1Q92994 677 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 GJD2Q9UKL4 321 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 PTCH2Q9Y6C5 1203 aa20.04■□□□□ 0.8
SHROOM1-205ENST00000488072 CCDC69A6NI79 296 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 ZBED4O75132 1171 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 PLEKHA8P1O95397 391 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 LIFRP42702 1097 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 KIF22Q14807 665 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 SNRNP48Q6IEG0 339 aaKnown RBP20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 GPR142Q7Z601 462 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 CATIPQ7Z7H3 387 aa20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 GTF3C2Q8WUA4 911 aaPredicted RBP20.03■□□□□ 0.8
SHROOM1-205ENST00000488072 KLF18A0A0U1RQI7 1052 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 KLRF2D3W0D1 207 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 CYTH3O43739 400 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 PLA2G6O60733 806 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 FLT3LGP49771 235 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 MICU3Q86XE3 530 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 ADGRF4Q8IZF3 695 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 KIF2CQ99661 725 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 RANBP17Q9H2T7 1088 aaKnown RBP20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 JMJD4Q9H9V9 463 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 HOMER2Q9NSB8 354 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 SRRDQ9UH36 339 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 PTPN22Q9Y2R2 807 aa20.02■□□□□ 0.8
SHROOM1-205ENST00000488072 COL11A1P12107 1806 aaPredicted RBP20.02■□□□□ 0.79
SHROOM1-205ENST00000488072 hCG_1642624A0A1W2PR95 340 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 PPFIA3O75145 1194 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 CYP2B6P20813 491 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 PSMA5P28066 241 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 ASPRV1Q53RT3 343 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 PLEKHH3Q7Z736 793 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 SGMS1Q86VZ5 419 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 RIOX2Q8IUF8 465 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 MB21D1Q8N884 522 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 SLC12A7Q9Y666 1083 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
SHROOM1-205ENST00000488072 PPP1R11O60927 126 aaPredicted RBP20■□□□□ 0.79
SHROOM1-205ENST00000488072 MUM1L1Q5H9M0 696 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 GPATCH4Q5T3I0 446 aaKnown RBP20■□□□□ 0.79
SHROOM1-205ENST00000488072 APOA5Q6Q788 366 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 CCDC82Q8N4S0 544 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 SRBD1Q8N5C6 995 aaKnown RBP20■□□□□ 0.79
SHROOM1-205ENST00000488072 MTA3Q9BTC8 594 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 TM6SF1Q9BZW5 370 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 FAM217BQ9NTX9 383 aaPredicted RBP20■□□□□ 0.79
SHROOM1-205ENST00000488072 HPS5Q9UPZ3 1129 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 CTDP1Q9Y5B0 961 aaPredicted RBP20■□□□□ 0.79
SHROOM1-205ENST00000488072 CYP46A1Q9Y6A2 500 aa20■□□□□ 0.79
SHROOM1-205ENST00000488072 DHX16O60231 1041 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 DDAH1O94760 285 aa19.99■□□□□ 0.79
SHROOM1-205ENST00000488072 MYCP01106 439 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms