RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 NEFLP07196 543 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 SNRPA1P09661 255 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 ALDH1B1P30837 517 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 CD68P34810 354 aaPredicted RBP6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 CRY2Q49AN0 593 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 RIC1Q4ADV7 1423 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 HGSNATQ68CP4 663 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 FAM117BQ6P1L5 589 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 TPTE2Q6XPS3 522 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 TMC7Q7Z402 723 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 GPC2Q8N158 579 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 KLHL23Q8NBE8 558 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 BSNDQ8WZ55 320 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 KLHDC7BQ96G42 594 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 PSMD1Q99460 953 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 AKTIPQ9H8T0 292 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 HACL1Q9UJ83 578 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 USP16Q9Y5T5 823 aa6.8□□□□□ -1.32
R3HDM1-218ENST00000487294 BTBD11A6QL63 1104 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 METTL12A8MUP2 240 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 KCNQ3O43525 872 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 HTATSF1O43719 755 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 ADAM11O75078 769 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 WISP1O95388 367 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 HOXA10P31260 410 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 EPHX2P34913 555 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 IARSP41252 1262 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 RGS19P49795 217 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 MAP2K1Q02750 393 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 MCTP1Q6DN14 999 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 NBPF5PQ86XG9 351 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 CNTROBQ8N137 903 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 AGGF1Q8N302 714 aaeCLIP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 ASAP3Q8TDY4 903 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 ALKBH8Q96BT7 664 aaKnown RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 DMRTB1Q96MA1 342 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 SEC31BQ9NQW1 1179 aa6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 IBTKQ9P2D0 1353 aaPredicted RBP6.79□□□□□ -1.32
R3HDM1-218ENST00000487294 ZNF541Q9H0D2 1346 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 ERVV-1B6SEH8 477 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 SOX1O00570 391 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 EIF1AYO14602 144 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 HSPA8P11142 646 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 DEFB115Q30KQ5 88 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 KIAA0319Q5VV43 1072 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 CCNJLQ8IV13 435 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 DZIP1LQ8IYY4 767 aaKnown RBP6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 FOXD4L4Q8WXT5 416 aaPredicted RBP6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 WNT8BQ93098 351 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 PHACTR3Q96KR7 559 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 TCF12Q99081 682 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 VPS33BQ9H267 617 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 GOLGA2P5Q9HBQ8 144 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 OSGEPQ9NPF4 335 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 CACNA1SQ13698 1873 aa6.78□□□□□ -1.32
R3HDM1-218ENST00000487294 WDR33Q9C0J8 1336 aaKnown RBP6.77□□□□□ -1.32
R3HDM1-218ENST00000487294 NPHP1O15259 732 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 MAPK1P28482 360 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 GRIA4P48058 902 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 LBX1P52954 281 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 CC2D1BQ5T0F9 858 aaKnown RBP6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 CCDC74AQ96AQ1 378 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 HHIPL1Q96JK4 782 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 CSRNP1Q96S65 589 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 DNAJC25Q9H1X3 360 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 LIN7BQ9HAP6 207 aa6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 DDX21Q9NR30 783 aaKnown RBP eCLIP6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 ZNF277Q9NRM2 450 aaPredicted RBP6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 NIP7Q9Y221 180 aaKnown RBP eCLIP6.77□□□□□ -1.33
R3HDM1-218ENST00000487294 RNF123Q5XPI4 1314 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 LTBP1Q14766 1721 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 A0A096LPE4 126 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 A0A1W2PPZ6 126 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 PRAMEF22A3QJZ6 481 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 U2SURPO15042 1029 aaKnown RBP6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 FSTP19883 344 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 PRKAR2BP31323 418 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 MAP2K2P36507 400 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 ECE1P42892 770 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 IKBKEQ14164 716 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 EAPPQ56P03 285 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 MAP1SQ66K74 1059 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 Q6ZS46 218 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 KIAA1211Q6ZU35 1233 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 USP50Q70EL3 339 aaPredicted RBP6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 SYNE4Q8N205 404 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 JDP2Q8WYK2 163 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 ABHD8Q96I13 439 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 CRAMP1Q96RY5 1269 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 NYXQ9GZU5 481 aa6.76□□□□□ -1.33
R3HDM1-218ENST00000487294 PCMTD2Q9NV79 361 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms