RNA–Protein interactions for RNA: ENST00000487279.6

IFFO1-209, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 2,786 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-209ENST00000487279 TRIM14Q14142 442 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 RNPC3Q96LT9 517 aaKnown RBP18.43■□□□□ 0.54
IFFO1-209ENST00000487279 OPA1O60313 960 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 NNTQ13423 1086 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 CCDC70Q6NSX1 233 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 B4GALNT4Q76KP1 1039 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 KRT26Q7Z3Y9 468 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 CREG2Q8IUH2 290 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 ZIM3Q96PE6 472 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 MTRQ99707 1265 aa18.43■□□□□ 0.54
IFFO1-209ENST00000487279 RDXP35241 583 aaKnown RBP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 CCDC57Q2TAC2 916 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 IRF2BP1Q8IU81 584 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 AMOTL1Q8IY63 956 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 WDR17Q8IZU2 1322 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 STK36Q9NRP7 1315 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 PKD1L3Q7Z443 1732 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 HSF2BPO75031 334 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 SSBP05455 408 aaKnown RBP eCLIP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 PARP1P09874 1014 aaKnown RBP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 ADD2P35612 726 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 MB21D1Q8N884 522 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 RWDD2AQ9UIY3 292 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 ZNF532Q9HCE3 1301 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 FSBPO95073 299 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 NAA35Q5VZE5 725 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 CRACR2BQ8N4Y2 399 aaPredicted RBP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 DNAJC7Q99615 494 aa18.42■□□□□ 0.54
IFFO1-209ENST00000487279 NHEJ1Q9H9Q4 299 aaPredicted RBP18.42■□□□□ 0.54
IFFO1-209ENST00000487279 MYH10P35580 1976 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 LSP1P33241 339 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 PRCPP42785 496 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 PMS1P54277 932 aaKnown RBP18.41■□□□□ 0.54
IFFO1-209ENST00000487279 KRT83P78385 493 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 IFT88Q13099 833 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 SPATA4Q8NEY3 305 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 N4BP2L2Q92802 583 aaPredicted RBP18.41■□□□□ 0.54
IFFO1-209ENST00000487279 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.41■□□□□ 0.54
IFFO1-209ENST00000487279 PIH1D3Q9NQM4 214 aaKnown RBP18.41■□□□□ 0.54
IFFO1-209ENST00000487279 CAPN6Q9Y6Q1 641 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 SPAG1Q07617 926 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 LRWD1Q9UFC0 647 aa18.41■□□□□ 0.54
IFFO1-209ENST00000487279 ESYT3A0FGR9 886 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 DEXIO95424 95 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 NAP1L1P55209 391 aaKnown RBP18.4■□□□□ 0.54
IFFO1-209ENST00000487279 SKOR1P84550 965 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 KLC4Q9NSK0 619 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 ZSCAN5CA6NGD5 496 aaPredicted RBP18.4■□□□□ 0.54
IFFO1-209ENST00000487279 B4DLN1 442 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 IPO7O95373 1038 aaKnown RBP18.4■□□□□ 0.54
IFFO1-209ENST00000487279 PLEKP08567 350 aaPredicted RBP18.4■□□□□ 0.54
IFFO1-209ENST00000487279 LIFRP42702 1097 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 HDLBPQ00341 1268 aaKnown RBP18.4■□□□□ 0.54
IFFO1-209ENST00000487279 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
IFFO1-209ENST00000487279 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 CCDC96Q2M329 555 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 CEP57Q86XR8 500 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 EHBP1Q8NDI1 1231 aa18.4■□□□□ 0.54
IFFO1-209ENST00000487279 MYH13Q9UKX3 1938 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 CIAO1O76071 339 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 TRIM21P19474 475 aaKnown RBP18.39■□□□□ 0.53
IFFO1-209ENST00000487279 DDR1Q08345 913 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 SNX12Q9UMY4 172 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 TBC1D2BQ9UPU7 963 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 LMTK3Q96Q04 1460 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 CHUKO15111 745 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 KIF1CO43896 1103 aaKnown RBP18.39■□□□□ 0.53
IFFO1-209ENST00000487279 FAM153BP0C7A2 387 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 FAM153CQ494X1 144 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 IQCEQ6IPM2 695 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 CCDC13Q8IYE1 715 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 ZNF473Q8WTR7 871 aaKnown RBP18.39■□□□□ 0.53
IFFO1-209ENST00000487279 PCMTD1Q96MG8 357 aaPredicted RBP18.39■□□□□ 0.53
IFFO1-209ENST00000487279 CCDC43Q96MW1 224 aaKnown RBP18.39■□□□□ 0.53
IFFO1-209ENST00000487279 EPB41L4AQ9HCS5 686 aaPredicted RBP18.39■□□□□ 0.53
IFFO1-209ENST00000487279 FAM153AQ9UHL3 310 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 CAPN11Q9UMQ6 739 aa18.39■□□□□ 0.53
IFFO1-209ENST00000487279 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
IFFO1-209ENST00000487279 FRMD3A2A2Y4 597 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 NCK2O43639 380 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 ELF1P32519 619 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 EPHB4P54760 987 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 KIF5AQ12840 1032 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 NEDD9Q14511 834 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 CCDC40Q4G0X9 1142 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 MMGT1Q8N4V1 131 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 ZNF263O14978 683 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 ZPR1O75312 459 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 MOCS3O95396 460 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 CYLC1P35663 651 aaPredicted RBP18.38■□□□□ 0.53
IFFO1-209ENST00000487279 DNA2P51530 1060 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 PTGDRQ13258 359 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 WTAPQ15007 396 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 KIRREL3Q8IZU9 778 aa18.38■□□□□ 0.53
IFFO1-209ENST00000487279 IFT81Q8WYA0 676 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms