RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
SEMA4D-219ENST00000486935 SLF1Q9BQI6 1058 aa18.23■□□□□ 0.51
SEMA4D-219ENST00000486935 UPF2Q9HAU5 1272 aaKnown RBP18.23■□□□□ 0.51
SEMA4D-219ENST00000486935 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
SEMA4D-219ENST00000486935 HSPD1P10809 573 aaKnown RBP18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 CTDSPL2Q05D32 466 aa18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 REPS2Q8NFH8 660 aa18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 ZNF214Q9UL59 606 aaPredicted RBP18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 ZMYND8Q9ULU4 1186 aaPredicted RBP18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 PFASO15067 1338 aa18.22■□□□□ 0.51
SEMA4D-219ENST00000486935 FOXP2O15409 715 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 MSCO60682 206 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 PGK2P07205 417 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 COL6A1P12109 1028 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 CYBAP13498 195 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 KCTD2Q14681 263 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 CHMP4CQ96CF2 233 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 MAML3Q96JK9 1138 aa18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.51
SEMA4D-219ENST00000486935 MYH8P13535 1937 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 ZBED4O75132 1171 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 SYN1P17600 705 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 ANO1Q5XXA6 986 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 SLFN13Q68D06 897 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 CPXCR1Q8N123 301 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 DSCC1Q9BVC3 393 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 USP26Q9BXU7 913 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 SENP6Q9GZR1 1112 aaPredicted RBP18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 PRO3102Q9H379 93 aa18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
SEMA4D-219ENST00000486935 COPB2P35606 906 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 SNRNP48Q6IEG0 339 aaKnown RBP18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 GMCL1P1Q8NEA9 526 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 TEX13BQ9BXU2 312 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 FEM1BQ9UK73 627 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 SYNPO2Q9UMS6 1093 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 RIPK3Q9Y572 518 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 RLFQ13129 1914 aa18.19■□□□□ 0.5
SEMA4D-219ENST00000486935 TSPY2A6NKD2 308 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 SEPT4O43236 478 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 MYCNP04198 464 aaPredicted RBP18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 BMP3P12645 472 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 LRRC26Q2I0M4 334 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 ZNF792Q3KQV3 632 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 GJC2Q5T442 439 aaPredicted RBP18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 MAP4K1Q92918 833 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 PCDH10Q9P2E7 1040 aa18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
SEMA4D-219ENST00000486935 DNM1LO00429 736 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 RANBP6O60518 1105 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 NMT2O60551 498 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 MCCP23508 829 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 ALX1Q15699 326 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 ARRDC4Q8NCT1 418 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 SLC38A10Q9HBR0 1119 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 ANAPC4Q9UJX5 808 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 TACC3Q9Y6A5 838 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 A0A0G2JMZ2 1700 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 PLIN4Q96Q06 1357 aa18.17■□□□□ 0.5
SEMA4D-219ENST00000486935 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
SEMA4D-219ENST00000486935 FGAP02671 866 aa18.16■□□□□ 0.5
SEMA4D-219ENST00000486935 TINF2Q9BSI4 451 aa18.16■□□□□ 0.5
SEMA4D-219ENST00000486935 IL17RBQ9NRM6 502 aa18.16■□□□□ 0.5
SEMA4D-219ENST00000486935 TOMM22Q9NS69 142 aa18.16■□□□□ 0.5
SEMA4D-219ENST00000486935 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
SEMA4D-219ENST00000486935 ATP2A1O14983 1001 aa18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 SLC1A4P43007 532 aa18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 ATN1P54259 1190 aaPredicted RBP18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 IKQ13123 557 aaPredicted RBP18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 RRP12Q5JTH9 1297 aaKnown RBP18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
SEMA4D-219ENST00000486935 KBTBD13C9JR72 458 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 TAL1P17542 331 aaPredicted RBP18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 HSPA4P34932 840 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 HAND2P61296 217 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 CREB3L3Q68CJ9 461 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 CHURC1Q8WUH1 139 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 STAG1Q8WVM7 1258 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 GMCL1Q96IK5 515 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 GDF15Q99988 308 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 NRBP1Q9UHY1 535 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 MTMR7Q9Y216 660 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 ZMYM6O95789 1325 aa18.14■□□□□ 0.49
SEMA4D-219ENST00000486935 GREB1LQ9C091 1923 aaPredicted RBP18.13■□□□□ 0.49
SEMA4D-219ENST00000486935 SLC27A2O14975 620 aa18.13■□□□□ 0.49
SEMA4D-219ENST00000486935 ORC4O43929 436 aa18.13■□□□□ 0.49
SEMA4D-219ENST00000486935 MAGEA10P43363 369 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms