RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 PPP1R1BQ9UD71 204 aaPredicted RBP13.3□□□□□ -0.28
PRKCB-207ENST00000486868 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 SIPA1L1O43166 1804 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 CCDC194A0A1B0GVG4 234 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 CLRN2A0PK11 232 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 ZBTB5O15062 677 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 NAPAP54920 295 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 EARS2Q5JPH6 523 aaKnown RBP13.29□□□□□ -0.28
PRKCB-207ENST00000486868 KANK3Q6NY19 840 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 FAM200AQ8TCP9 573 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
PRKCB-207ENST00000486868 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 CCDC34Q96HJ3 373 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 PDLIM2Q96JY6 352 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 PIGSQ96S52 555 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 ARHGEF10LQ9HCE6 1279 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 HOOK1Q9UJC3 728 aaKnown RBP13.29□□□□□ -0.28
PRKCB-207ENST00000486868 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
PRKCB-207ENST00000486868 SMCO2A6NFE2 343 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 F5H6K3 240 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 GH2P01242 217 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 CAP2P40123 477 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 PRPHP41219 470 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 SLC1A4P43007 532 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 KLRC3Q07444 240 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 CAMK4Q16566 473 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 PIK3AP1Q6ZUJ8 805 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 VEZTQ9HBM0 779 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 KIAA1468Q9P260 1216 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 KCNH3Q9ULD8 1083 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 MRVI1Q9Y6F6 885 aa13.28□□□□□ -0.28
PRKCB-207ENST00000486868 PSDA5PKW4 1024 aaPredicted RBP13.27□□□□□ -0.29
PRKCB-207ENST00000486868 ASNSP08243 561 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 LMNB1P20700 586 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 GMPSP49915 693 aaPredicted RBP13.27□□□□□ -0.29
PRKCB-207ENST00000486868 MRPL12P52815 198 aaKnown RBP13.27□□□□□ -0.29
PRKCB-207ENST00000486868 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.297e-8■■□□□ 12.1
PRKCB-207ENST00000486868 STX1AQ16623 288 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 NBPF9Q3BBW0 867 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 C4orf32Q8N8J7 132 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 NAP1L4Q99733 375 aaKnown RBP13.27□□□□□ -0.29
PRKCB-207ENST00000486868 GPCPD1Q9NPB8 672 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 RIC8AQ9NPQ8 531 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 CNOT7Q9UIV1 285 aaKnown RBP13.27□□□□□ -0.29
PRKCB-207ENST00000486868 ZBTB21Q9ULJ3 1066 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.29
PRKCB-207ENST00000486868 FAM205CA6NFA0 338 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 FAM196BA6NMK8 535 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 H7C1D1 291 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 NDUFB10O96000 172 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 BMP3P12645 472 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 MYH6P13533 1939 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 LONP1P36776 959 aaKnown RBP13.26□□□□□ -0.29
PRKCB-207ENST00000486868 ADCY7P51828 1080 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 PRELPP51888 382 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 PTGDRQ13258 359 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 RASA3Q14644 834 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 RRP1BQ14684 758 aaKnown RBP13.26□□□□□ -0.29
PRKCB-207ENST00000486868 TPRNQ4KMQ1 711 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 HS1BP3Q53T59 392 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 FRMPD2Q68DX3 1309 aaPredicted RBP13.26□□□□□ -0.29
PRKCB-207ENST00000486868 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 CKAP2LQ8IYA6 745 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
PRKCB-207ENST00000486868 NLGN2Q8NFZ4 835 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 PIBF1Q8WXW3 757 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 PANK2Q9BZ23 570 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 VAT1LQ9HCJ6 419 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 GOPCQ9HD26 462 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 TUBE1Q9UJT0 475 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 PPP2R3BQ9Y5P8 575 aa13.26□□□□□ -0.29
PRKCB-207ENST00000486868 GDF11O95390 407 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 RASSF7Q02833 373 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 ZNF174Q15697 407 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 TTBK2Q6IQ55 1244 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 RASGRP2Q7LDG7 609 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 NEK8Q86SG6 692 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 HOMER1Q86YM7 354 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
PRKCB-207ENST00000486868 GPC2Q8N158 579 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 TEPSINQ96N21 525 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 BPIFA3Q9BQP9 254 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 TMEM39BQ9GZU3 492 aa13.25□□□□□ -0.29
PRKCB-207ENST00000486868 PHF20L1A8MW92 1017 aa13.24□□□□□ -0.29
PRKCB-207ENST00000486868 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms