RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 LHX8Q68G74 356 aa23.29■■□□□ 1.32
TNFRSF18-204ENST00000486728 REPS2Q8NFH8 660 aa23.29■■□□□ 1.32
TNFRSF18-204ENST00000486728 IL17RBQ9NRM6 502 aa23.29■■□□□ 1.32
TNFRSF18-204ENST00000486728 HIP1O00291 1037 aa23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 ATP2A1O14983 1001 aa23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 COBLO75128 1261 aa23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 HAND2P61296 217 aa23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 SLFN13Q68D06 897 aa23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 CHMP4CQ96CF2 233 aa23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 DIS3Q9Y2L1 958 aaKnown RBP23.28■■□□□ 1.32
TNFRSF18-204ENST00000486728 ORC4O43929 436 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 RANBP6O60518 1105 aaKnown RBP23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 IGHA2P01877 340 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 FGRP09769 529 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 PCP11498 1178 aaKnown RBP23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 BMP3P12645 472 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 CYBAP13498 195 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 KIFC2Q96AC6 838 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 GMCL1Q96IK5 515 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 MAML3Q96JK9 1138 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 DIAPH3Q9NSV4 1193 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 NRBP1Q9UHY1 535 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 STX8Q9UNK0 236 aa23.27■■□□□ 1.32
TNFRSF18-204ENST00000486728 GSPT1P15170 499 aaKnown RBP23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 SLC1A4P43007 532 aa23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 MNX1P50219 401 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 STAT2P52630 851 aa23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 OAZ1P54368 228 aa23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 SNRNP48Q6IEG0 339 aaKnown RBP23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 FAM160B2Q86V87 743 aa23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 CHURC1Q8WUH1 139 aa23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 TOMM22Q9NS69 142 aa23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 ISY1Q9ULR0 285 aaKnown RBP23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 COLQQ9Y215 455 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF18-204ENST00000486728 ALPK3Q96L96 1907 aa23.25■■□□□ 1.31
TNFRSF18-204ENST00000486728 RRP12Q5JTH9 1297 aaKnown RBP23.25■■□□□ 1.31
TNFRSF18-204ENST00000486728 TTC22Q5TAA0 569 aa23.25■■□□□ 1.31
TNFRSF18-204ENST00000486728 CHRDL2Q6WN34 429 aa23.25■■□□□ 1.31
TNFRSF18-204ENST00000486728 SLC38A10Q9HBR0 1119 aa23.25■■□□□ 1.31
TNFRSF18-204ENST00000486728 FBXO40Q9UH90 709 aa23.25■■□□□ 1.31
TNFRSF18-204ENST00000486728 SEPT4O43236 478 aa23.24■■□□□ 1.31
TNFRSF18-204ENST00000486728 NT5C2P49902 561 aa23.24■■□□□ 1.31
TNFRSF18-204ENST00000486728 IKQ13123 557 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF18-204ENST00000486728 RNF41Q9H4P4 317 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF18-204ENST00000486728 DNM1LO00429 736 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 COL6A1P12109 1028 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 TBC1D10CQ8IV04 446 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 CPXCR1Q8N123 301 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 MSL3Q8N5Y2 521 aaKnown RBP23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 ARRDC4Q8NCT1 418 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 DDX11Q96FC9 970 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 IL25Q9H293 177 aa23.23■■□□□ 1.31
TNFRSF18-204ENST00000486728 TMEM232C9JQI7 657 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 PLA2G6O60733 806 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 MCCP23508 829 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 ZNF792Q3KQV3 632 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 RASGRP2Q7LDG7 609 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 C7orf61Q8IZ16 206 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 CHST13Q8NET6 341 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 STAG1Q8WVM7 1258 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 PFASO15067 1338 aa23.22■■□□□ 1.31
TNFRSF18-204ENST00000486728 PGK2P07205 417 aa23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 MFSD6Q6ZSS7 791 aa23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 TINF2Q9BSI4 451 aa23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 RAVER2Q9HCJ3 691 aaKnown RBP23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 TCP11L1Q9NUJ3 509 aa23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 RIPK3Q9Y572 518 aa23.21■■□□□ 1.31
TNFRSF18-204ENST00000486728 CEP290O15078 2479 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 KBTBD13C9JR72 458 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 NOVP48745 357 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 AKNAD1Q5T1N1 836 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 RCSD1Q6JBY9 416 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 MTMR7Q9Y216 660 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 CNPY2Q9Y2B0 182 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 SMCHD1A6NHR9 2005 aa23.2■■□□□ 1.3
TNFRSF18-204ENST00000486728 A0A1W2PPC1 479 aa23.19■■□□□ 1.3
TNFRSF18-204ENST00000486728 TKFCQ3LXA3 575 aa23.19■■□□□ 1.3
TNFRSF18-204ENST00000486728 KCTD1Q719H9 257 aa23.19■■□□□ 1.3
TNFRSF18-204ENST00000486728 ANKRD35Q8N283 1001 aa23.19■■□□□ 1.3
TNFRSF18-204ENST00000486728 DCAF4Q8WV16 495 aa23.19■■□□□ 1.3
TNFRSF18-204ENST00000486728 NEDD4P46934 1319 aa23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 SYNGAP1Q96PV0 1343 aa23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 ZNF213O14771 459 aa23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 TOP1P11387 765 aaKnown RBP23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 ZNF467Q7Z7K2 595 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 SENP6Q9GZR1 1112 aaPredicted RBP23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 RBM27Q9P2N5 1060 aaKnown RBP23.18■■□□□ 1.3
TNFRSF18-204ENST00000486728 RARBP10826 455 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 CCDC96Q2M329 555 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 ESR2Q92731 530 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 TTC14Q96N46 770 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 TMEM47Q9BQJ4 181 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 DSCC1Q9BVC3 393 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 ACAD9Q9H845 621 aa23.17■■□□□ 1.3
TNFRSF18-204ENST00000486728 DNAJC25-GNG10A0A024R161 153 aa23.16■■□□□ 1.3
TNFRSF18-204ENST00000486728 AKR1A1P14550 325 aa23.16■■□□□ 1.3
TNFRSF18-204ENST00000486728 CCDC178Q5BJE1 867 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms