RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 RIOX2Q8IUF8 465 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 USP6NLQ92738 828 aa21.39■■□□□ 1.01
COL1A1-207ENST00000486572 CTDP1Q9Y5B0 961 aaPredicted RBP21.39■■□□□ 1.01
COL1A1-207ENST00000486572 PLA2G6O60733 806 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
COL1A1-207ENST00000486572 XRCC5P13010 732 aaKnown RBP21.38■■□□□ 1.01
COL1A1-207ENST00000486572 CYP2B6P20813 491 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 COPB2P35606 906 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 STAT3P40763 770 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 UBXN2AP68543 259 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 MAP2K5Q13163 448 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 GRB14Q14449 540 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 ENAHQ8N8S7 591 aaPredicted RBP21.38■■□□□ 1.01
COL1A1-207ENST00000486572 NCOA7Q8NI08 942 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 ANKS1AQ92625 1134 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 APBA2Q99767 749 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 TEX13BQ9BXU2 312 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 SLC38A10Q9HBR0 1119 aa21.38■■□□□ 1.01
COL1A1-207ENST00000486572 RBBP6Q7Z6E9 1792 aaKnown RBP21.38■■□□□ 1.01
COL1A1-207ENST00000486572 ATP2A1O14983 1001 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 STRNO43815 780 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 HMGCRP04035 888 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 INHAP05111 366 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 FDX1P10109 184 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 PDHBP11177 359 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 STOX1Q6ZVD7 989 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 CYB5R4Q7L1T6 521 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 TMEM106CQ9BVX2 250 aa21.37■■□□□ 1.01
COL1A1-207ENST00000486572 SNHG28P0DPA3 235 aa21.36■■□□□ 1.01
COL1A1-207ENST00000486572 OAZ1P54368 228 aa21.36■■□□□ 1.01
COL1A1-207ENST00000486572 SNRNP48Q6IEG0 339 aaKnown RBP21.36■■□□□ 1.01
COL1A1-207ENST00000486572 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
COL1A1-207ENST00000486572 PNMA1Q8ND90 353 aa21.36■■□□□ 1.01
COL1A1-207ENST00000486572 TRIB2Q92519 343 aa21.36■■□□□ 1.01
COL1A1-207ENST00000486572 CENPFP49454 3210 aa21.36■■□□□ 1.01
COL1A1-207ENST00000486572 FRMPD2Q68DX3 1309 aaPredicted RBP21.35■■□□□ 1.01
COL1A1-207ENST00000486572 SLC27A2O14975 620 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 ZKSCAN1P17029 563 aaPredicted RBP21.35■■□□□ 1.01
COL1A1-207ENST00000486572 ADORA2AP29274 412 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 NECTIN1Q15223 517 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 MTFR1Q15390 333 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 CREB3L3Q68CJ9 461 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 ABRAQ8N0Z2 381 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 CPXCR1Q8N123 301 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 RAVER2Q9HCJ3 691 aaKnown RBP21.35■■□□□ 1.01
COL1A1-207ENST00000486572 PRR12Q9ULL5 1215 aa21.35■■□□□ 1.01
COL1A1-207ENST00000486572 HOXC6P09630 235 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 FCER1AP12319 257 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 CCL5P13501 91 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 RGS19P49795 217 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 ZNF543Q08ER8 600 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 SEC23AQ15436 765 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 IFIT1BQ5T764 474 aaKnown RBP21.34■■□□□ 1.01
COL1A1-207ENST00000486572 BTNL9Q6UXG8 535 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 GPCPD1Q9NPB8 672 aa21.34■■□□□ 1.01
COL1A1-207ENST00000486572 POTEFA5A3E0 1075 aa21.33■■□□□ 1.01
COL1A1-207ENST00000486572 SART3Q15020 963 aaKnown RBP21.33■■□□□ 1.01
COL1A1-207ENST00000486572 GPATCH4Q5T3I0 446 aaKnown RBP21.33■■□□□ 1.01
COL1A1-207ENST00000486572 RNF20Q5VTR2 975 aa21.33■■□□□ 1.01
COL1A1-207ENST00000486572 TTBK2Q6IQ55 1244 aa21.33■■□□□ 1.01
COL1A1-207ENST00000486572 MB21D2Q8IYB1 491 aaPredicted RBP21.33■■□□□ 1.01
COL1A1-207ENST00000486572 ERICH2A1L162 156 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 IFIT3O14879 490 aaKnown RBP21.32■■□□□ 1
COL1A1-207ENST00000486572 SLC16A2P36021 539 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 KCTD2Q14681 263 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 CCL14Q16627 93 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 SYDE2Q5VT97 1194 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 DPP9Q86TI2 863 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 MMP19Q99542 508 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 RNF208Q9H0X6 261 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 UNC93B1Q9H1C4 597 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 SLC5A4Q9NY91 659 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 RIPK3Q9Y572 518 aa21.32■■□□□ 1
COL1A1-207ENST00000486572 ZNF536O15090 1300 aa21.31■■□□□ 1
COL1A1-207ENST00000486572 SLC4A3P48751 1232 aa21.31■■□□□ 1
COL1A1-207ENST00000486572 NPLOC4Q8TAT6 608 aa21.31■■□□□ 1
COL1A1-207ENST00000486572 GOLGA8HP0CJ92 632 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 ANTXR2P58335 489 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 TRIM32Q13049 653 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 ASPRV1Q53RT3 343 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 CCDC174Q6PII3 467 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 CHST3Q7LGC8 479 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 CHST13Q8NET6 341 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 RANBP17Q9H2T7 1088 aaKnown RBP21.3■■□□□ 1
COL1A1-207ENST00000486572 FBXO40Q9UH90 709 aa21.3■■□□□ 1
COL1A1-207ENST00000486572 COBLO75128 1261 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 REC8O95072 547 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 GJB1P08034 283 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 PRKAR2AP13861 404 aaKnown RBP21.29■■□□□ 1
COL1A1-207ENST00000486572 MCM5P33992 734 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 SNAP25P60880 206 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 WTAPQ15007 396 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 TMEM67Q5HYA8 995 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 MAP3K21Q5TCX8 1036 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.29■■□□□ 1
COL1A1-207ENST00000486572 AGBL1Q96MI9 1066 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 HOMER2Q9NSB8 354 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 FLRT1Q9NZU1 646 aa21.29■■□□□ 1
COL1A1-207ENST00000486572 KIAA0100Q14667 2235 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms