RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RIOX2Q8IUF8 465 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 PRPF38AQ8NAV1 312 aaKnown RBP15.22■□□□□ 0.03
CHMP3-208ENST00000486404 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 MMP19Q99542 508 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 INCENPQ9NQS7 918 aa15.22■□□□□ 0.03
CHMP3-208ENST00000486404 MKI67P46013 3256 aaKnown RBP15.21■□□□□ 0.03
CHMP3-208ENST00000486404 ALPK3Q96L96 1907 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 ZNF213O14771 459 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 STAT2P52630 851 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 CACNB2Q08289 660 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-208ENST00000486404 TBC1D10CQ8IV04 446 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 ABRAQ8N0Z2 381 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 STAG1Q8WVM7 1258 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 GMCL1Q96IK5 515 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-208ENST00000486404 ADAMTS5Q9UNA0 930 aa15.21■□□□□ 0.03
CHMP3-208ENST00000486404 NEDD4P46934 1319 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 TMEM232C9JQI7 657 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 CNGA1P29973 690 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 IMMTQ16891 758 aaKnown RBP15.2■□□□□ 0.02
CHMP3-208ENST00000486404 FAM160B2Q86V87 743 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 CPXCR1Q8N123 301 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 REPS2Q8NFH8 660 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 NPLOC4Q8TAT6 608 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 ESR2Q92731 530 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 DPF3Q92784 378 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 CRISPLD2Q9H0B8 497 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 IL17RBQ9NRM6 502 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
CHMP3-208ENST00000486404 FGRP09769 529 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 TOP1P11387 765 aaKnown RBP15.19■□□□□ 0.02
CHMP3-208ENST00000486404 MCCP23508 829 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-208ENST00000486404 CYP2C19P33261 490 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 ANKLE1Q8NAG6 615 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 CHURC1Q8WUH1 139 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 NBPF3Q9H094 633 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 TACC3Q9Y6A5 838 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 MYH6P13533 1939 aa15.19■□□□□ 0.02
CHMP3-208ENST00000486404 FDX1P10109 184 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 NT5C2P49902 561 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 KCTD1Q719H9 257 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 NECAB2Q7Z6G3 386 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 SLC38A10Q9HBR0 1119 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 RAVER2Q9HCJ3 691 aaKnown RBP15.18■□□□□ 0.02
CHMP3-208ENST00000486404 MCM3APO60318 1980 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 CEP290O15078 2479 aa15.18■□□□□ 0.02
CHMP3-208ENST00000486404 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 MSCO60682 206 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 COBLO75128 1261 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 PGK2P07205 417 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 OAZ1P54368 228 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
CHMP3-208ENST00000486404 RASGRP2Q7LDG7 609 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 UBE2Q1Q7Z7E8 422 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 DIS3LQ8TF46 1054 aaKnown RBP15.17■□□□□ 0.02
CHMP3-208ENST00000486404 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 PAWRQ96IZ0 340 aaKnown RBP15.17■□□□□ 0.02
CHMP3-208ENST00000486404 MAML3Q96JK9 1138 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 HOMER2Q9NSB8 354 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 TCP11L1Q9NUJ3 509 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 FBXO40Q9UH90 709 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 OGDHLQ9ULD0 1010 aa15.17■□□□□ 0.02
CHMP3-208ENST00000486404 KDM4AO75164 1064 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
CHMP3-208ENST00000486404 CYBAP13498 195 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 CCDC178Q5BJE1 867 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 RCSD1Q6JBY9 416 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 ANKRD35Q8N283 1001 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 TMEM47Q9BQJ4 181 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 C11orf49Q9H6J7 331 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 CNNM2Q9H8M5 875 aa15.16■□□□□ 0.02
CHMP3-208ENST00000486404 DDX20Q9UHI6 824 aaKnown RBP15.16■□□□□ 0.02
CHMP3-208ENST00000486404 CHMLP26374 656 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 CCDC174Q6PII3 467 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 KRT23Q9C075 422 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 NR2E3Q9Y5X4 410 aa15.15■□□□□ 0.02
CHMP3-208ENST00000486404 FRMPD2Q68DX3 1309 aaPredicted RBP15.15■□□□□ 0.02
CHMP3-208ENST00000486404 LRRC37A2A6NM11 1700 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 B4E1Z4 1266 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 EVI5O60447 810 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 PLA2G6O60733 806 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 NOVP48745 357 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 CHST13Q8NET6 341 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 TTC14Q96N46 770 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 IL25Q9H293 177 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 KAT14Q9H8E8 782 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 RNF146Q9NTX7 359 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 PRR12Q9ULL5 1215 aa15.14■□□□□ 0.01
CHMP3-208ENST00000486404 CNPY2Q9Y2B0 182 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms