RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 YDJCA8MPS7 323 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
PKP4-213ENST00000486254 SMC2O95347 1197 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 NAPAP54920 295 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 TGFB2P61812 414 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
PKP4-213ENST00000486254 USP17L2Q6R6M4 530 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 TMEM179Q6ZVK1 233 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 AOPEPQ8N6M6 819 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 AK8Q96MA6 479 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
PKP4-213ENST00000486254 PCDHA5Q9Y5H7 936 aa13.62□□□□□ -0.23
PKP4-213ENST00000486254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
PKP4-213ENST00000486254 USP17L5A8MUK1 530 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 WNT7AO00755 349 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 NEMFO60524 1076 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 MYL1P05976 194 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 KCNA3P22001 575 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 PNOCQ13519 176 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 NCAPHQ15003 741 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 NONOQ15233 471 aaKnown RBP eCLIP13.61□□□□□ -0.23
PKP4-213ENST00000486254 ZNF174Q15697 407 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 E2F4Q16254 413 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 GMCL1P1Q8NEA9 526 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 AGBL3Q8NEM8 1001 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 SYMPKQ92797 1274 aaKnown RBP13.61□□□□□ -0.23
PKP4-213ENST00000486254 GSDMAQ96QA5 445 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 MAGEF1Q9HAY2 307 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 HDAC9Q9UKV0 1011 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
PKP4-213ENST00000486254 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 C21orf2O43822 256 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 TXLNAP40222 546 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 PLCB2Q00722 1185 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 MYL5Q02045 173 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 MORC3Q14149 939 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 CFAP100Q494V2 611 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
PKP4-213ENST00000486254 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 PIBF1Q8WXW3 757 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 SMARCE1Q969G3 411 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 IMPACTQ9P2X3 320 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 SERTAD1Q9UHV2 236 aa13.6□□□□□ -0.23
PKP4-213ENST00000486254 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 DDTLA6NHG4 134 aaPredicted RBP13.59□□□□□ -0.23
PKP4-213ENST00000486254 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 ATP2B1P20020 1258 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
PKP4-213ENST00000486254 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
PKP4-213ENST00000486254 NOM1Q5C9Z4 860 aaKnown RBP13.59□□□□□ -0.23
PKP4-213ENST00000486254 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.59□□□□□ -0.23
PKP4-213ENST00000486254 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 GMCL1Q96IK5 515 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 PIGSQ96S52 555 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 CCSER1Q9C0I3 900 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 CUEDC2Q9H467 287 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 CLIP2Q9UDT6 1046 aa13.59□□□□□ -0.23
PKP4-213ENST00000486254 VWA3AA6NCI4 1184 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 MCM7P33993 719 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 RBM5P52756 815 aaKnown RBP eCLIP13.58□□□□□ -0.23
PKP4-213ENST00000486254 USP49Q70CQ1 688 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 NEK8Q86SG6 692 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.23
PKP4-213ENST00000486254 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 RIC8AQ9NPQ8 531 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 SPTLC3Q9NUV7 552 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 MAN1B1Q9UKM7 699 aa13.58□□□□□ -0.23
PKP4-213ENST00000486254 COL4A5P29400 1685 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 A0A087X0B3 334 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 ZBTB5O15062 677 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 OFD1O75665 1012 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 DPEP1P16444 411 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 ADCY7P51828 1080 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 GSDMDP57764 484 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 DPYDQ12882 1025 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 DTHD1Q6ZMT9 781 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 ZFPM1Q8IX07 1006 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 LARGE2Q8N3Y3 721 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 ENOX1Q8TC92 643 aaKnown RBP13.58□□□□□ -0.24
PKP4-213ENST00000486254 ERCC4Q92889 916 aaPredicted RBP13.58□□□□□ -0.24
PKP4-213ENST00000486254 EPSTI1Q96J88 318 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 NAP1L4Q99733 375 aaKnown RBP13.58□□□□□ -0.24
PKP4-213ENST00000486254 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
PKP4-213ENST00000486254 JMJD4Q9H9V9 463 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
PKP4-213ENST00000486254 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
PKP4-213ENST00000486254 BIN1O00499 593 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 TBC1D12O60347 775 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 TERF1P54274 439 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 INF2Q27J81 1249 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 PDXDC2PQ6P474 469 aa13.57□□□□□ -0.24
PKP4-213ENST00000486254 DEFB132Q7Z7B7 95 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms