RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 WNT8AQ9H1J5 351 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 MROH8Q9H579 483 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 SNRKQ9NRH2 765 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 SLC5A4Q9NY91 659 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 LRP2BPQ9P2M1 347 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 PCDHA11Q9Y5I1 949 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 ELP1O95163 1332 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
SND1-213ENST00000486037 PARP14Q460N5 1801 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 FCER1AP12319 257 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 SHMT1P34896 483 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
SND1-213ENST00000486037 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
SND1-213ENST00000486037 ARHGAP45Q92619 1136 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 MMP19Q99542 508 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 NOL10Q9BSC4 688 aaKnown RBP11.96□□□□□ -0.49
SND1-213ENST00000486037 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 HOXC10Q9NYD6 342 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 COG6Q9Y2V7 657 aa11.96□□□□□ -0.49
SND1-213ENST00000486037 MYO15AQ9UKN7 3530 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 ZNF318Q5VUA4 2279 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 COL4A4P53420 1690 aaPredicted RBP11.95□□□□□ -0.5
SND1-213ENST00000486037 A0A0U1RQG5 324 aaPredicted RBP11.95□□□□□ -0.5
SND1-213ENST00000486037 CTAGE5O15320 804 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
SND1-213ENST00000486037 BAG3O95817 575 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
SND1-213ENST00000486037 MS4A1P11836 297 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 TTLL4Q14679 1199 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 GLT1D1Q96MS3 346 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
SND1-213ENST00000486037 PTPRCP08575 1304 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 ZBBXA8MT70 800 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 RBAK-RBAKDNI3L0D1 243 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 LPXNO60711 386 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 C6orf222P0C671 652 aaPredicted RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 UBTFL1P0CB47 393 aaPredicted RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 ATP2A2P16615 1042 aaKnown RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 PLCG2P16885 1265 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 PTGS1P23219 599 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 CST5P28325 142 aaPredicted RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 PLCD1P51178 756 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 GRB10Q13322 594 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 TMEM57Q8N5G2 664 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 ARNTL2Q8WYA1 636 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 VTI1AQ96AJ9 217 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 SCLYQ96I15 445 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 MTIF3Q9H2K0 278 aaKnown RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 HIPK3Q9H422 1215 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 SERPINB13Q9UIV8 391 aa11.94□□□□□ -0.5
SND1-213ENST00000486037 ZHX1Q9UKY1 873 aaPredicted RBP11.94□□□□□ -0.5
SND1-213ENST00000486037 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
SND1-213ENST00000486037 FLOT1O75955 427 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
SND1-213ENST00000486037 TAP1Q03518 808 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 FAM178BQ8IXR5 827 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 SPICE1Q8N0Z3 855 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 GJD3Q8N144 294 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 MB21D1Q8N884 522 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 MIGA1Q8NAN2 632 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 NOC4LQ9BVI4 516 aaKnown RBP11.93□□□□□ -0.5
SND1-213ENST00000486037 EHD4Q9H223 541 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 PIH1D3Q9NQM4 214 aaKnown RBP11.93□□□□□ -0.5
SND1-213ENST00000486037 FAM184BQ9ULE4 1060 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 CNPY2Q9Y2B0 182 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 AKAP2Q9Y2D5 859 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 DCHS1Q96JQ0 3298 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 DMDP11532 3685 aa11.93□□□□□ -0.5
SND1-213ENST00000486037 GRIN2DO15399 1336 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
SND1-213ENST00000486037 IL9P15248 144 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 BEX3Q00994 111 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 TMEM67Q5HYA8 995 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 B4GALNT3Q6L9W6 998 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 SIAH1Q8IUQ4 282 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 TRPV6Q9H1D0 765 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 UPF3AQ9H1J1 476 aaKnown RBP11.92□□□□□ -0.5
SND1-213ENST00000486037 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 FBXO28Q9NVF7 368 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 DIS3Q9Y2L1 958 aaKnown RBP11.92□□□□□ -0.5
SND1-213ENST00000486037 SCN5AQ14524 2016 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 MCM3APO60318 1980 aa11.92□□□□□ -0.5
SND1-213ENST00000486037 ASTN1O14525 1302 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 SLC25A27O95847 323 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 GJA9P57773 515 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 GABPAQ06546 454 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 GNASQ5JWF2 1037 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 GORABQ5T7V8 394 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 RIOX2Q8IUF8 465 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 REPS2Q8NFH8 660 aa11.91□□□□□ -0.5
SND1-213ENST00000486037 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.91□□□□□ -0.5
SND1-213ENST00000486037 FGD4Q96M96 766 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms