RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 FLRT1Q9NZU1 646 aa21.73■■□□□ 1.07
COL1A1-206ENST00000485870 RPTORQ8N122 1335 aa21.73■■□□□ 1.07
COL1A1-206ENST00000485870 ZNF236Q9UL36 1845 aa21.73■■□□□ 1.07
COL1A1-206ENST00000485870 ZBED4O75132 1171 aa21.72■■□□□ 1.07
COL1A1-206ENST00000485870 SLC4A3P48751 1232 aa21.72■■□□□ 1.07
COL1A1-206ENST00000485870 CACNB2Q08289 660 aaPredicted RBP21.72■■□□□ 1.07
COL1A1-206ENST00000485870 MAP3K21Q5TCX8 1036 aa21.72■■□□□ 1.07
COL1A1-206ENST00000485870 KCTD1Q719H9 257 aa21.72■■□□□ 1.07
COL1A1-206ENST00000485870 ESR2Q92731 530 aa21.72■■□□□ 1.07
COL1A1-206ENST00000485870 TFRCP02786 760 aaKnown RBP21.71■■□□□ 1.07
COL1A1-206ENST00000485870 HOXC6P09630 235 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 FCER1AP12319 257 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 STAT2P52630 851 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 SNRNP48Q6IEG0 339 aaKnown RBP21.71■■□□□ 1.07
COL1A1-206ENST00000485870 CPXCR1Q8N123 301 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 MMP19Q99542 508 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 TMEM47Q9BQJ4 181 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 ZKSCAN3Q9BRR0 538 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 TEX13BQ9BXU2 312 aa21.71■■□□□ 1.07
COL1A1-206ENST00000485870 COBLO75128 1261 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 KDM4AO75164 1064 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 TOP1P11387 765 aaKnown RBP21.7■■□□□ 1.06
COL1A1-206ENST00000485870 PTH1RQ03431 593 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 CCDC96Q2M329 555 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 MFSD14CQ5VZR4 134 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 FAM160B2Q86V87 743 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 ABRAQ8N0Z2 381 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 CHURC1Q8WUH1 139 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 SLC38A10Q9HBR0 1119 aa21.7■■□□□ 1.06
COL1A1-206ENST00000485870 RAVER2Q9HCJ3 691 aaKnown RBP21.7■■□□□ 1.06
COL1A1-206ENST00000485870 ZNFX1Q9P2E3 1918 aaKnown RBP21.7■■□□□ 1.06
COL1A1-206ENST00000485870 B4E1Z4 1266 aa21.69■■□□□ 1.06
COL1A1-206ENST00000485870 SGSM2O43147 1006 aa21.69■■□□□ 1.06
COL1A1-206ENST00000485870 CCND3P30281 292 aaPredicted RBP21.69■■□□□ 1.06
COL1A1-206ENST00000485870 COPB2P35606 906 aa21.69■■□□□ 1.06
COL1A1-206ENST00000485870 RCSD1Q6JBY9 416 aa21.69■■□□□ 1.06
COL1A1-206ENST00000485870 DCAF4Q8WV16 495 aa21.69■■□□□ 1.06
COL1A1-206ENST00000485870 CCDC136Q96JN2 1154 aa21.69■■□□□ 1.06
COL1A1-206ENST00000485870 FARP2O94887 1054 aaPredicted RBP21.68■■□□□ 1.06
COL1A1-206ENST00000485870 NEFLP07196 543 aa21.68■■□□□ 1.06
COL1A1-206ENST00000485870 CYP2C19P33261 490 aa21.68■■□□□ 1.06
COL1A1-206ENST00000485870 KCTD2Q14681 263 aa21.68■■□□□ 1.06
COL1A1-206ENST00000485870 CRISPLD2Q9H0B8 497 aa21.68■■□□□ 1.06
COL1A1-206ENST00000485870 SLC5A4Q9NY91 659 aa21.68■■□□□ 1.06
COL1A1-206ENST00000485870 RIPK3Q9Y572 518 aa21.68■■□□□ 1.06
COL1A1-206ENST00000485870 ATP2A1O14983 1001 aa21.67■■□□□ 1.06
COL1A1-206ENST00000485870 PGK2P07205 417 aa21.67■■□□□ 1.06
COL1A1-206ENST00000485870 IQCA1Q86XH1 822 aa21.67■■□□□ 1.06
COL1A1-206ENST00000485870 TTC14Q96N46 770 aa21.67■■□□□ 1.06
COL1A1-206ENST00000485870 FRMPD2Q68DX3 1309 aaPredicted RBP21.66■■□□□ 1.06
COL1A1-206ENST00000485870 NT5C2P49902 561 aa21.66■■□□□ 1.06
COL1A1-206ENST00000485870 SNAP25P60880 206 aa21.66■■□□□ 1.06
COL1A1-206ENST00000485870 OLFML2BQ68BL8 750 aa21.66■■□□□ 1.06
COL1A1-206ENST00000485870 KRT23Q9C075 422 aa21.66■■□□□ 1.06
COL1A1-206ENST00000485870 CNNM2Q9H8M5 875 aa21.66■■□□□ 1.06
COL1A1-206ENST00000485870 PRR12Q9ULL5 1215 aa21.66■■□□□ 1.06
COL1A1-206ENST00000485870 U3KPZ7 1027 aaPredicted RBP21.66■■□□□ 1.06
COL1A1-206ENST00000485870 PLA2G6O60733 806 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 FDX1P10109 184 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 SLC16A2P36021 539 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 OAZ1P54368 228 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 TTBK2Q6IQ55 1244 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 CCDC174Q6PII3 467 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 UBE2Q1Q7Z7E8 422 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 MAML3Q96JK9 1138 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 HOMER2Q9NSB8 354 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 ZSWIM5Q9P217 1185 aa21.65■■□□□ 1.06
COL1A1-206ENST00000485870 PLXNA1Q9UIW2 1896 aa21.64■■□□□ 1.06
COL1A1-206ENST00000485870 CYP21A2P08686 494 aa21.64■■□□□ 1.05
COL1A1-206ENST00000485870 PDHBP11177 359 aa21.64■■□□□ 1.05
COL1A1-206ENST00000485870 CNGA1P29973 690 aa21.64■■□□□ 1.05
COL1A1-206ENST00000485870 CCDC178Q5BJE1 867 aa21.64■■□□□ 1.05
COL1A1-206ENST00000485870 BMP2KLQ5H9B9 411 aa21.64■■□□□ 1.05
COL1A1-206ENST00000485870 DGKHQ86XP1 1220 aa21.64■■□□□ 1.05
COL1A1-206ENST00000485870 ZSCAN10Q96SZ4 725 aaPredicted RBP21.64■■□□□ 1.05
COL1A1-206ENST00000485870 TNKSO95271 1327 aa21.63■■□□□ 1.05
COL1A1-206ENST00000485870 IGHA2P01877 340 aa21.63■■□□□ 1.05
COL1A1-206ENST00000485870 CAPN2P17655 700 aa21.63■■□□□ 1.05
COL1A1-206ENST00000485870 TRPV1Q8NER1 839 aa21.63■■□□□ 1.05
COL1A1-206ENST00000485870 DIS3LQ8TF46 1054 aaKnown RBP21.63■■□□□ 1.05
COL1A1-206ENST00000485870 DDX11Q96FC9 970 aa21.63■■□□□ 1.05
COL1A1-206ENST00000485870 AGBL1Q96MI9 1066 aa21.63■■□□□ 1.05
COL1A1-206ENST00000485870 ZNF536O15090 1300 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 CYBAP13498 195 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 ZNF792Q3KQV3 632 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 SYDE2Q5VT97 1194 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 PRPF38BQ5VTL8 546 aaKnown RBP21.62■■□□□ 1.05
COL1A1-206ENST00000485870 ENAHQ8N8S7 591 aaPredicted RBP21.62■■□□□ 1.05
COL1A1-206ENST00000485870 PNMA1Q8ND90 353 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 CHST13Q8NET6 341 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 ESYT1Q9BSJ8 1104 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 UBAC1Q9BSL1 405 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 KAT14Q9H8E8 782 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 FBXO40Q9UH90 709 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 OGDHLQ9ULD0 1010 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 TAF6LQ9Y6J9 622 aa21.62■■□□□ 1.05
COL1A1-206ENST00000485870 ZNF543Q08ER8 600 aa21.61■■□□□ 1.05
COL1A1-206ENST00000485870 TRDNQ13061 729 aa21.61■■□□□ 1.05
COL1A1-206ENST00000485870 PRAMEF19Q5SWL8 479 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms