RNA–Protein interactions for RNA: ENST00000485673.5

GNAS-244, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-244	ENST00000485673	ERCC3	P19447	782 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	PTPRE	P23469	700 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	COPB2	P35606	906 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	WDR78	Q5VTH9	848 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	RIOX2	Q8IUF8	465 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	PNMA1	Q8ND90	353 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	USP6NL	Q92738	828 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	CHMP4C	Q96CF2	233 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	IVNS1ABP	Q9Y6Y0	642 aa		32.8	■■■□□ 2.84
GNAS-244	ENST00000485673	SLC15A5	A6NIM6	579 aa		32.79	■■■□□ 2.84
GNAS-244	ENST00000485673	IK	Q13123	557 aa	Predicted RBP	32.79	■■■□□ 2.84
GNAS-244	ENST00000485673	SEC23A	Q15436	765 aa		32.79	■■■□□ 2.84
GNAS-244	ENST00000485673	CCDC96	Q2M329	555 aa		32.79	■■■□□ 2.84
GNAS-244	ENST00000485673	SH3TC2	Q8TF17	1288 aa		32.79	■■■□□ 2.84
GNAS-244	ENST00000485673	ZNF333	Q96JL9	665 aa		32.79	■■■□□ 2.84
GNAS-244	ENST00000485673	CAPN15	O75808	1086 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	XRCC5	P13010	732 aa	Known RBP	32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	OAZ1	P54368	228 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	IFIT1B	Q5T764	474 aa	Known RBP	32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	BTNL9	Q6UXG8	535 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	RASGRP2	Q7LDG7	609 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	NCAPG2	Q86XI2	1143 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	MB21D2	Q8IYB1	491 aa	Predicted RBP	32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	TEX13B	Q9BXU2	312 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	CENPF	P49454	3210 aa		32.78	■■■□□ 2.84
GNAS-244	ENST00000485673	RGS2	P41220	211 aa		32.77	■■■□□ 2.84
GNAS-244	ENST00000485673	GRB14	Q14449	540 aa		32.77	■■■□□ 2.84
GNAS-244	ENST00000485673	SART3	Q15020	963 aa	Known RBP	32.77	■■■□□ 2.84
GNAS-244	ENST00000485673	MTA3	Q9BTC8	594 aa		32.77	■■■□□ 2.84
GNAS-244	ENST00000485673	ERICH2	A1L162	156 aa		32.76	■■■□□ 2.83
GNAS-244	ENST00000485673	REC8	O95072	547 aa		32.76	■■■□□ 2.83
GNAS-244	ENST00000485673	ZNF543	Q08ER8	600 aa		32.76	■■■□□ 2.83
GNAS-244	ENST00000485673	MAP2K5	Q13163	448 aa		32.76	■■■□□ 2.83
GNAS-244	ENST00000485673	GPATCH4	Q5T3I0	446 aa	Known RBP	32.76	■■■□□ 2.83
GNAS-244	ENST00000485673	IFIT3	O14879	490 aa	Known RBP	32.75	■■■□□ 2.83
GNAS-244	ENST00000485673	CYP2B6	P20813	491 aa		32.75	■■■□□ 2.83
GNAS-244	ENST00000485673	TSGA10IP	Q3SY00	556 aa		32.75	■■■□□ 2.83
GNAS-244	ENST00000485673	TRMT44	Q8IYL2	757 aa	Known RBP	32.75	■■■□□ 2.83
GNAS-244	ENST00000485673	ABRA	Q8N0Z2	381 aa		32.75	■■■□□ 2.83
GNAS-244	ENST00000485673	PRR12	Q9ULL5	1215 aa		32.75	■■■□□ 2.83
GNAS-244	ENST00000485673	UBXN2A	P68543	259 aa		32.74	■■■□□ 2.83
GNAS-244	ENST00000485673	SNRNP48	Q6IEG0	339 aa	Known RBP	32.74	■■■□□ 2.83
GNAS-244	ENST00000485673	TTBK2	Q6IQ55	1244 aa		32.74	■■■□□ 2.83
GNAS-244	ENST00000485673	FRMPD2	Q68DX3	1309 aa	Predicted RBP	32.74	■■■□□ 2.83
GNAS-244	ENST00000485673	ZNFX1	Q9P2E3	1918 aa	Known RBP	32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	ZNF236	Q9UL36	1845 aa		32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	ELN	P15502	786 aa		32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	MCM5	P33992	734 aa		32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	CPXCR1	Q8N123	301 aa		32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	APBA2	Q99767	749 aa		32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	GPCPD1	Q9NPB8	672 aa		32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	BIN2	Q9UBW5	565 aa	Predicted RBP	32.73	■■■□□ 2.83
GNAS-244	ENST00000485673	EPB41L2	O43491	1005 aa	Known RBP	32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	HOXC6	P09630	235 aa		32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	ZKSCAN1	P17029	563 aa	Predicted RBP	32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	ANTXR2	P58335	489 aa		32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	WTAP	Q15007	396 aa		32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	SYDE2	Q5VT97	1194 aa		32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	RAVER2	Q9HCJ3	691 aa	Known RBP	32.72	■■■□□ 2.83
GNAS-244	ENST00000485673	FCER1A	P12319	257 aa		32.71	■■■□□ 2.83
GNAS-244	ENST00000485673	ASPRV1	Q53RT3	343 aa		32.71	■■■□□ 2.83
GNAS-244	ENST00000485673	CHST3	Q7LGC8	479 aa		32.71	■■■□□ 2.83
GNAS-244	ENST00000485673	IGDCC4	Q8TDY8	1250 aa		32.71	■■■□□ 2.83
GNAS-244	ENST00000485673	HMGCR	P04035	888 aa		32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	ADORA2A	P29274	412 aa		32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	SLC16A2	P36021	539 aa		32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	TMEM67	Q5HYA8	995 aa		32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	KCNB2	Q92953	911 aa		32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	RANBP17	Q9H2T7	1088 aa	Known RBP	32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	RIPK3	Q9Y572	518 aa		32.7	■■■□□ 2.83
GNAS-244	ENST00000485673	PRC1	O43663	620 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	INHA	P05111	366 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	KRT32	Q14532	448 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	TMEM87B	Q96K49	555 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	MMP19	Q99542	508 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	TMEM106C	Q9BVX2	250 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	SLC5A4	Q9NY91	659 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	ZNF536	O15090	1300 aa		32.69	■■■□□ 2.82
GNAS-244	ENST00000485673	PARP1	P09874	1014 aa	Known RBP	32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	HSPA4	P34932	840 aa		32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	32.68	■■■□□ 2.82	1e-13	■□□□□ 9.5
GNAS-244	ENST00000485673	DPP9	Q86TI2	863 aa		32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	RASEF	Q8IZ41	740 aa		32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	CHST13	Q8NET6	341 aa		32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	TRIB2	Q92519	343 aa		32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	FBXO40	Q9UH90	709 aa		32.68	■■■□□ 2.82
GNAS-244	ENST00000485673	GOLGA8H	P0CJ92	632 aa		32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	KCTD2	Q14681	263 aa		32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	TKFC	Q3LXA3	575 aa		32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	TMTC2	Q8N394	836 aa		32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	NEK1	Q96PY6	1258 aa		32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	RBBP6	Q7Z6E9	1792 aa	Known RBP	32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	KIAA0100	Q14667	2235 aa	Known RBP	32.67	■■■□□ 2.82
GNAS-244	ENST00000485673	SOX10	P56693	466 aa		32.66	■■■□□ 2.82
GNAS-244	ENST00000485673	PNMA2	Q9UL42	364 aa		32.66	■■■□□ 2.82
GNAS-244	ENST00000485673	SLC4A3	P48751	1232 aa		32.65	■■■□□ 2.82
GNAS-244	ENST00000485673	MTFR1	Q15390	333 aa		32.65	■■■□□ 2.82
GNAS-244	ENST00000485673	CCDC174	Q6PII3	467 aa		32.65	■■■□□ 2.82
GNAS-244	ENST00000485673	NPLOC4	Q8TAT6	608 aa		32.65	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms