RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 OLFML2BQ68BL8 750 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 ZSCAN25Q6NSZ9 544 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 DDRGK1Q96HY6 314 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 MOV10L1Q9BXT6 1211 aaKnown RBP12.7□□□□□ -0.38
HMGN1-215ENST00000485550 TACC3Q9Y6A5 838 aa12.7□□□□□ -0.38
HMGN1-215ENST00000485550 BDP1A6H8Y1 2624 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-215ENST00000485550 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-215ENST00000485550 RAD21O60216 631 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
HMGN1-215ENST00000485550 ERCC3P19447 782 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 ICA1Q05084 483 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 FPGSQ05932 587 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 CTR9Q6PD62 1173 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 TIFAQ96CG3 184 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 FAM122AQ96E09 287 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 ARHGEF10LQ9HCE6 1279 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-215ENST00000485550 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
HMGN1-215ENST00000485550 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-215ENST00000485550 FLOT1O75955 427 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 PLS1Q14651 629 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 C16orf86Q6ZW13 317 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 ADAMTS19Q8TE59 1207 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 ATG4CQ96DT6 458 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 CCDC17Q96LX7 622 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 STRBPQ96SI9 672 aaKnown RBP12.68□□□□□ -0.38
HMGN1-215ENST00000485550 GAS2L1Q99501 681 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-215ENST00000485550 SPATC1LQ9H0A9 340 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 PRDM12Q9H4Q4 367 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 TMEM39AQ9NV64 488 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 THEGQ9P2T0 379 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 PHF24Q9UPV7 400 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
HMGN1-215ENST00000485550 BAZ2AQ9UIF9 1905 aaKnown RBP12.67□□□□□ -0.38
HMGN1-215ENST00000485550 MINDY4BA8MYZ0 360 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 KIAA0355O15063 1070 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 STRNO43815 780 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 PGK1P00558 417 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 EEF2P13639 858 aaKnown RBP12.67□□□□□ -0.38
HMGN1-215ENST00000485550 CCDC85BQ15834 202 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-215ENST00000485550 KBTBD3Q8NAB2 608 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 GPATCH3Q96I76 525 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 MAML3Q96JK9 1138 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 ASB2Q96Q27 587 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 UHRF1Q96T88 793 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-215ENST00000485550 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.67□□□□□ -0.385e-10■■□□□ 13.4
HMGN1-215ENST00000485550 VCPKMTQ9H867 229 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 XPNPEP3Q9NQH7 507 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
HMGN1-215ENST00000485550 A0A1W2PQ45 241 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-215ENST00000485550 A0A1W2PQY0 241 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 RNF113AO15541 343 aaKnown RBP12.66□□□□□ -0.38
HMGN1-215ENST00000485550 RARBP10826 455 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 PBX2P40425 430 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 NUBP1P53384 320 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 NCAPG2Q86XI2 1143 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-215ENST00000485550 ATXN2LQ8WWM7 1075 aaKnown RBP12.66□□□□□ -0.38
HMGN1-215ENST00000485550 LENG1Q96BZ8 264 aaPredicted RBP12.66□□□□□ -0.38
HMGN1-215ENST00000485550 PBX4Q9BYU1 374 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 KANSL2Q9H9L4 492 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 FBXO28Q9NVF7 368 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 SLC5A4Q9NY91 659 aa12.66□□□□□ -0.38
HMGN1-215ENST00000485550 PRRC2BQ5JSZ5 2229 aaKnown RBP12.65□□□□□ -0.38
HMGN1-215ENST00000485550 M0R2C6 588 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 APPP05067 770 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 FAAP100Q0VG06 881 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 RNF180Q86T96 592 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 SHCBP1Q8NEM2 672 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 APPBP2Q92624 585 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 MKNK2Q9HBH9 465 aa12.65□□□□□ -0.38
HMGN1-215ENST00000485550 ARPP21Q9UBL0 812 aaPredicted RBP12.65□□□□□ -0.38
HMGN1-215ENST00000485550 WDR46O15213 610 aaKnown RBP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 GPAA1O43292 621 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 PRDM1O75626 825 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 TAL1P17542 331 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 RASA1P20936 1047 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 IGFBP4P22692 258 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 TDO2P48775 406 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 MRPS5P82675 430 aaKnown RBP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 TMEM132BQ14DG7 1078 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 FAM83BQ5T0W9 1011 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 NECAB3Q96P71 396 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 SEC62Q99442 399 aaKnown RBP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 EPB41L4AQ9HCS5 686 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-215ENST00000485550 REV3LO60673 3130 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 CHD9Q3L8U1 2897 aa12.64□□□□□ -0.39
HMGN1-215ENST00000485550 DCDC2CA8MYV0 355 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms