RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 GAS8O95995 478 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 HNRNPH2P55795 449 aaKnown RBP16.69■□□□□ 0.26
RXRA-203ENST00000484822 CTSWP56202 376 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 SIK1P57059 783 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 SRGAP1Q7Z6B7 1085 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 SYCE1Q8N0S2 351 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 VPS37BQ9H9H4 285 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 CDC23Q9UJX2 597 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 IVNS1ABPQ9Y6Y0 642 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 TBC1D8O95759 1140 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 RAD51AP2Q09MP3 1159 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
RXRA-203ENST00000484822 ODF2LQ9ULJ1 636 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 USTQ9Y2C2 406 aa16.69■□□□□ 0.26
RXRA-203ENST00000484822 ZMYND10O75800 440 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 MRPS9P82933 396 aaKnown RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 COG7P83436 770 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 GOLGA8FQ08AF8 430 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 GOLGA8DPQ0D2H9 430 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 RAB3IPQ96QF0 476 aaPredicted RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 PCCAP05165 728 aaPredicted RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 NIM1KQ8IY84 436 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 LARGE2Q8N3Y3 721 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 ZBTB38Q8NAP3 1195 aaPredicted RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 NAP1L4Q99733 375 aaKnown RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 HAUS4Q9H6D7 363 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 ARMT1Q9H993 441 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 ADGRL3Q9HAR2 1447 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 KCNJ18B7U540 433 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 KCNJ12Q14500 433 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 KIF22Q14807 665 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
RXRA-203ENST00000484822 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 KRIT1O00522 736 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 ITIH3Q06033 890 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 SPATA31A3Q5VYP0 1347 aa16.68■□□□□ 0.26
RXRA-203ENST00000484822 ARHGAP42A6NI28 874 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 CD2BP2O95400 341 aaKnown RBP16.67■□□□□ 0.26
RXRA-203ENST00000484822 RBBP5Q15291 538 aaKnown RBP16.67■□□□□ 0.26
RXRA-203ENST00000484822 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 ENC1O14682 589 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 ATP8B1O43520 1251 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 TROVE2P10155 538 aaKnown RBP eCLIP16.67■□□□□ 0.262e-8■□□□□ 10.2
RXRA-203ENST00000484822 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
RXRA-203ENST00000484822 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 DDX27Q96GQ7 796 aaKnown RBP16.67■□□□□ 0.26
RXRA-203ENST00000484822 TRIM4Q9C037 500 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 MAP3K15Q6ZN16 1313 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 A0A087WUV0 522 aaPredicted RBP16.67■□□□□ 0.26
RXRA-203ENST00000484822 LRRD1A4D1F6 860 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 SMIM24O75264 130 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 CLCN6P51797 869 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 PTPN21Q16825 1174 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 LRWD1Q9UFC0 647 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 SP4Q02446 784 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 WDR44Q5JSH3 913 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 ANKRD13CQ8N6S4 541 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 SNX29Q8TEQ0 813 aa16.67■□□□□ 0.26
RXRA-203ENST00000484822 GLI2P10070 1586 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 TAF5LO75529 589 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 HARSP12081 509 aaKnown RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 PTH1RQ03431 593 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 PPP2R5AQ15172 486 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 SLC35F6Q8N357 371 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 TDRD7Q8NHU6 1098 aaKnown RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 KIFC2Q96AC6 838 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 STX10O60499 249 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 TCP1P17987 556 aaKnown RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 ATP5JP18859 108 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 GUCY2DQ02846 1103 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 UIMC1Q96RL1 719 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 FNBP1Q96RU3 617 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 RABGAP1Q9Y3P9 1069 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 ANKRD65E5RJM6 399 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 CHMP2AO43633 222 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 QTRT2Q9H974 415 aaKnown RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 PFDN4Q9NQP4 134 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 SLC5A4Q9NY91 659 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 AMFRQ9UKV5 643 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 NOD1Q9Y239 953 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 RXRBP28702 533 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 IL6STP40189 918 aaPredicted RBP16.66■□□□□ 0.26
RXRA-203ENST00000484822 IFNAR2P48551 515 aa16.66■□□□□ 0.26
RXRA-203ENST00000484822 A0A087WWV3 80 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 ABCB4P21439 1286 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 NDUFA8P51970 172 aa16.65■□□□□ 0.26
RXRA-203ENST00000484822 PPP2R5DQ14738 602 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms