RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 PLA2G6O60733 806 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 SYDE2Q5VT97 1194 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 MTMR8Q96EF0 704 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 CLMNQ96JQ2 1002 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 ZSCAN16Q9H4T2 348 aaPredicted RBP23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 SH3GLB2Q9NR46 395 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 EMILIN3Q9NT22 766 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 TRPM7Q96QT4 1865 aa23.6■■□□□ 1.37
VCPKMT-203ENST00000484763 MYH15Q9Y2K3 1946 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 hCG_1984214I3L0E3 225 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 MMP1P03956 469 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 PPATQ06203 517 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 RESTQ13127 1097 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 LDLRAD1Q5T700 205 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 WWC2Q6AWC2 1192 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 HEATR3Q7Z4Q2 680 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 FAM160B2Q86V87 743 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 ERO1BQ86YB8 467 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 ZNF713Q8N859 430 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 RBM46Q8TBY0 533 aaKnown RBP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 CHURC1Q8WUH1 139 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 GPKOWQ92917 476 aaPredicted RBP eCLIP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 C12orf42Q96LP6 360 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 GBP4Q96PP9 640 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 PNMA6FA0A0J9YX94 578 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 SPDYE5A6NIY4 337 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 ZBTB5O15062 677 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 VCAM1P19320 739 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 HMGCS2P54868 508 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 SAFBQ15424 915 aaKnown RBP eCLIP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 CLEC17AQ6ZS10 378 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 FAM177A1Q8N128 213 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 SHISA4Q96DD7 197 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 PHF20Q9BVI0 1012 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 GBA2Q9HCG7 927 aaPredicted RBP23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 BARHL2Q9NY43 387 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 FEM1BQ9UK73 627 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 KCNJ14Q9UNX9 436 aa23.59■■□□□ 1.37
VCPKMT-203ENST00000484763 CELF2O95319 508 aaKnown RBP23.58■■□□□ 1.37
VCPKMT-203ENST00000484763 DGKZQ13574 1117 aa23.58■■□□□ 1.37
VCPKMT-203ENST00000484763 CCDC148Q8NFR7 591 aa23.58■■□□□ 1.37
VCPKMT-203ENST00000484763 ITGBL1O95965 494 aaPredicted RBP23.57■■□□□ 1.36
VCPKMT-203ENST00000484763 KIF23Q02241 960 aaPredicted RBP23.57■■□□□ 1.36
VCPKMT-203ENST00000484763 CDC37Q16543 378 aaPredicted RBP23.57■■□□□ 1.36
VCPKMT-203ENST00000484763 CNKSR2Q8WXI2 1034 aa23.57■■□□□ 1.36
VCPKMT-203ENST00000484763 TMOD4Q9NZQ9 345 aa23.57■■□□□ 1.36
VCPKMT-203ENST00000484763 PRR12Q9ULL5 1215 aa23.57■■□□□ 1.36
VCPKMT-203ENST00000484763 STXBP3O00186 592 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 SH3D19Q5HYK7 790 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 CCDC12Q8WUD4 166 aaPredicted RBP23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 OTUD5Q96G74 571 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 LOC285556D6RIA3 1793 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 BAG4O95429 457 aaKnown RBP23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 PPIL2Q13356 520 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 GNL2Q13823 731 aaKnown RBP23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 DIS3L2Q8IYB7 885 aaKnown RBP23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 C2orf69Q8N8R5 385 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 TANGO6Q9C0B7 1094 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 RPAP3Q9H6T3 665 aaPredicted RBP23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 BRMS1Q9HCU9 246 aa23.56■■□□□ 1.36
VCPKMT-203ENST00000484763 PARP14Q460N5 1801 aa23.55■■□□□ 1.36
VCPKMT-203ENST00000484763 NLRP5P59047 1200 aa23.55■■□□□ 1.36
VCPKMT-203ENST00000484763 QRICH1Q2TAL8 776 aa23.55■■□□□ 1.36
VCPKMT-203ENST00000484763 BRAPQ7Z569 592 aa23.55■■□□□ 1.36
VCPKMT-203ENST00000484763 KIF28PB7ZC32 967 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 CALML3P27482 149 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 NAPAP54920 295 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 FOXD4L6Q3SYB3 417 aaPredicted RBP23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 TYW1BQ6NUM6 668 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 FOXD4L3Q6VB84 417 aaPredicted RBP23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 KIFC2Q96AC6 838 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 OPTNQ96CV9 577 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 SLF1Q9BQI6 1058 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 FOXP1Q9H334 677 aaPredicted RBP23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 IRF6O14896 467 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 U2AF2P26368 475 aaKnown RBP eCLIP23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 KRT2P35908 639 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 PPP1R18Q6NYC8 613 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 FBXO28Q9NVF7 368 aa23.54■■□□□ 1.36
VCPKMT-203ENST00000484763 CXCL11O14625 94 aa23.53■■□□□ 1.36
VCPKMT-203ENST00000484763 PPP1R11O60927 126 aaPredicted RBP23.53■■□□□ 1.36
VCPKMT-203ENST00000484763 SLC10A4Q96EP9 437 aa23.53■■□□□ 1.36
VCPKMT-203ENST00000484763 KCNH4Q9UQ05 1017 aa23.53■■□□□ 1.36
VCPKMT-203ENST00000484763 TCHHQ07283 1943 aa23.53■■□□□ 1.36
VCPKMT-203ENST00000484763 BTBD18B2RXH4 712 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 NPY5RQ15761 445 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 GALNT17Q6IS24 598 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 PRPF38AQ8NAV1 312 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 RANBP17Q9H2T7 1088 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 A0A0G2JLL6 359 aaPredicted RBP23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 ESYT2A0FGR8 921 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 KIF3CO14782 793 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 FLOT1O75955 427 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 FAM173BQ6P4H8 233 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 PRRT2Q7Z6L0 340 aaPredicted RBP23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 COA7Q96BR5 231 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 AMNQ9BXJ7 453 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 ZMYND12Q9H0C1 365 aa23.52■■□□□ 1.36
VCPKMT-203ENST00000484763 PCDHA4Q9UN74 947 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms