RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 SNAI1O95863 264 aaPredicted RBP21.9■■□□□ 1.1
DDR1-245ENST00000484556 CST5P28325 142 aaPredicted RBP21.9■■□□□ 1.1
DDR1-245ENST00000484556 MTX1Q13505 466 aa21.9■■□□□ 1.1
DDR1-245ENST00000484556 RIOX2Q8IUF8 465 aa21.9■■□□□ 1.1
DDR1-245ENST00000484556 PCSK9Q8NBP7 692 aaKnown RBP21.9■■□□□ 1.1
DDR1-245ENST00000484556 HIPK3Q9H422 1215 aa21.9■■□□□ 1.1
DDR1-245ENST00000484556 FBXO28Q9NVF7 368 aa21.9■■□□□ 1.1
DDR1-245ENST00000484556 MCM3APO60318 1980 aa21.9■■□□□ 1.1
DDR1-245ENST00000484556 IDH1O75874 414 aaKnown RBP21.89■■□□□ 1.09
DDR1-245ENST00000484556 CD4P01730 458 aa21.89■■□□□ 1.09
DDR1-245ENST00000484556 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
DDR1-245ENST00000484556 CCDC158Q5M9N0 1113 aa21.89■■□□□ 1.09
DDR1-245ENST00000484556 MAGEB6Q8N7X4 407 aa21.89■■□□□ 1.09
DDR1-245ENST00000484556 PI4K2BG5E9Z4 385 aa21.88■■□□□ 1.09
DDR1-245ENST00000484556 POLR3DP05423 398 aaPredicted RBP21.88■■□□□ 1.09
DDR1-245ENST00000484556 CA3P07451 260 aa21.88■■□□□ 1.09
DDR1-245ENST00000484556 GABPAQ06546 454 aa21.88■■□□□ 1.09
DDR1-245ENST00000484556 G3BP1Q13283 466 aaKnown RBP eCLIP21.88■■□□□ 1.09
DDR1-245ENST00000484556 HLA-CQ95604 372 aa21.88■■□□□ 1.09
DDR1-245ENST00000484556 NOB1Q9ULX3 412 aaKnown RBP21.88■■□□□ 1.09
DDR1-245ENST00000484556 COL4A4P53420 1690 aaPredicted RBP21.88■■□□□ 1.09
DDR1-245ENST00000484556 POU3F3P20264 500 aaPredicted RBP21.87■■□□□ 1.09
DDR1-245ENST00000484556 STAT3P40763 770 aa21.87■■□□□ 1.09
DDR1-245ENST00000484556 GNASQ5JWF2 1037 aa21.87■■□□□ 1.09
DDR1-245ENST00000484556 WNT8AQ9H1J5 351 aa21.87■■□□□ 1.09
DDR1-245ENST00000484556 VCPKMTQ9H867 229 aa21.87■■□□□ 1.09
DDR1-245ENST00000484556 ATP2A2P16615 1042 aaKnown RBP21.86■■□□□ 1.09
DDR1-245ENST00000484556 SIAH1Q8IUQ4 282 aa21.86■■□□□ 1.09
DDR1-245ENST00000484556 UPF3AQ9H1J1 476 aaKnown RBP21.86■■□□□ 1.09
DDR1-245ENST00000484556 SPC25Q9HBM1 224 aa21.86■■□□□ 1.09
DDR1-245ENST00000484556 PNMA6EA0A0J9YXQ4 647 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 PRR33A8MZF0 331 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 WDR46O15213 610 aaKnown RBP21.85■■□□□ 1.09
DDR1-245ENST00000484556 GJA9P57773 515 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 TNNI3KQ59H18 835 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 TMEM179Q6ZVK1 233 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 UIMC1Q96RL1 719 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 NOC4LQ9BVI4 516 aaKnown RBP21.85■■□□□ 1.09
DDR1-245ENST00000484556 ZNF214Q9UL59 606 aaPredicted RBP21.85■■□□□ 1.09
DDR1-245ENST00000484556 FPGT-TNNI3KV9GXZ4 949 aa21.85■■□□□ 1.09
DDR1-245ENST00000484556 BEX3Q00994 111 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 ICA1Q05084 483 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 ACVR2BQ13705 512 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 TMEM67Q5HYA8 995 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 CERS3Q8IU89 383 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 FAM9BQ8IZU0 186 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 MSL3Q8N5Y2 521 aaKnown RBP21.84■■□□□ 1.09
DDR1-245ENST00000484556 ARNTL2Q8WYA1 636 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 VWCEQ96DN2 955 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 SCLYQ96I15 445 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
DDR1-245ENST00000484556 ARHGEF10LQ9HCE6 1279 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 ADAMTS5Q9UNA0 930 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 TMX2Q9Y320 296 aa21.84■■□□□ 1.09
DDR1-245ENST00000484556 VWA5AO00534 786 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 CTAGE5O15320 804 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 ARHGEF15O94989 841 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 GNAI3P08754 354 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 NHLH1Q02575 133 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 CCDC144BQ3MJ40 725 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 MAMDC4Q6UXC1 1216 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 REPS2Q8NFH8 660 aa21.83■■□□□ 1.09
DDR1-245ENST00000484556 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.83■■□□□ 1.09
DDR1-245ENST00000484556 SCN5AQ14524 2016 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 CYP2D6P10635 497 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 AKR1B1P15121 316 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 TTLL4Q14679 1199 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 CXCL17Q6UXB2 119 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 DDX11Q96FC9 970 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 TRPV6Q9H1D0 765 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 SH2D4AQ9H788 454 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 MCM9Q9NXL9 1143 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 TLR7Q9NYK1 1049 aaKnown RBP21.82■■□□□ 1.08
DDR1-245ENST00000484556 WDFY4Q6ZS81 3184 aa21.82■■□□□ 1.08
DDR1-245ENST00000484556 E9PSI1 815 aa21.81■■□□□ 1.08
DDR1-245ENST00000484556 IGSF3O75054 1194 aa21.81■■□□□ 1.08
DDR1-245ENST00000484556 SLC43A3Q8NBI5 491 aa21.81■■□□□ 1.08
DDR1-245ENST00000484556 DYNLL2Q96FJ2 89 aa21.81■■□□□ 1.08
DDR1-245ENST00000484556 ZNF512BQ96KM6 892 aaPredicted RBP21.81■■□□□ 1.08
DDR1-245ENST00000484556 RIOK1Q9BRS2 568 aaKnown RBP21.81■■□□□ 1.08
DDR1-245ENST00000484556 ANTXR1Q9H6X2 564 aa21.81■■□□□ 1.08
DDR1-245ENST00000484556 PPP1R9AQ9ULJ8 1098 aa21.81■■□□□ 1.08
DDR1-245ENST00000484556 BRWD1Q9NSI6 2320 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 B4GALT4O60513 344 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 COPB2P35606 906 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 GRB10Q13322 594 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 SPRED2Q7Z698 418 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 RPUSD2Q8IZ73 545 aaKnown RBP21.8■■□□□ 1.08
DDR1-245ENST00000484556 GPR108Q9NPR9 543 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 DBNLQ9UJU6 430 aaKnown RBP21.8■■□□□ 1.08
DDR1-245ENST00000484556 RIPK3Q9Y572 518 aa21.8■■□□□ 1.08
DDR1-245ENST00000484556 DNAJC25-GNG10A0A024R161 153 aa21.79■■□□□ 1.08
DDR1-245ENST00000484556 RAD21O60216 631 aa21.79■■□□□ 1.08
DDR1-245ENST00000484556 TAP1Q03518 808 aa21.79■■□□□ 1.08
DDR1-245ENST00000484556 SNRNP48Q6IEG0 339 aaKnown RBP21.79■■□□□ 1.08
DDR1-245ENST00000484556 GRIN2DO15399 1336 aa21.79■■□□□ 1.08
DDR1-245ENST00000484556 OS9Q13438 667 aaPredicted RBP21.78■■□□□ 1.08
DDR1-245ENST00000484556 ITGA7Q13683 1181 aa21.78■■□□□ 1.08
DDR1-245ENST00000484556 FAM83BQ5T0W9 1011 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms