RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 STX8Q9UNK0 236 aa16.31■□□□□ 0.2
ITGA4-210ENST00000484404 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 MYH6P13533 1939 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 STRNO43815 780 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 CYBAP13498 195 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 SYN1P17600 705 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 RIOX2Q8IUF8 465 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 MAML3Q96JK9 1138 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
ITGA4-210ENST00000484404 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
ITGA4-210ENST00000484404 CTDP1Q9Y5B0 961 aaPredicted RBP16.3■□□□□ 0.2
ITGA4-210ENST00000484404 NR2E3Q9Y5X4 410 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 LRRC37A2A6NM11 1700 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 DNAH12Q6ZR08 3092 aa16.3■□□□□ 0.2
ITGA4-210ENST00000484404 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
ITGA4-210ENST00000484404 SLC25A27O95847 323 aa16.29■□□□□ 0.2
ITGA4-210ENST00000484404 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
ITGA4-210ENST00000484404 SNAP25P60880 206 aa16.29■□□□□ 0.2
ITGA4-210ENST00000484404 IKQ13123 557 aaPredicted RBP16.29■□□□□ 0.2
ITGA4-210ENST00000484404 KCTD2Q14681 263 aa16.29■□□□□ 0.2
ITGA4-210ENST00000484404 HOMER2Q9NSB8 354 aa16.29■□□□□ 0.2
ITGA4-210ENST00000484404 RIPK3Q9Y572 518 aa16.29■□□□□ 0.2
ITGA4-210ENST00000484404 FGAP02671 866 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 BMP3P12645 472 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 TAL1P17542 331 aaPredicted RBP16.28■□□□□ 0.2
ITGA4-210ENST00000484404 SDSP20132 328 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 MCCP23508 829 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
ITGA4-210ENST00000484404 KCTD1Q719H9 257 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 PRPF38AQ8NAV1 312 aaKnown RBP16.28■□□□□ 0.2
ITGA4-210ENST00000484404 GMCL1P1Q8NEA9 526 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 MKL1Q969V6 931 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
ITGA4-210ENST00000484404 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
ITGA4-210ENST00000484404 LTBP2Q14767 1821 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 ZBED4O75132 1171 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 PDE4AP27815 886 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 GJC2Q5T442 439 aaPredicted RBP16.27■□□□□ 0.2
ITGA4-210ENST00000484404 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 LENG1Q96BZ8 264 aaPredicted RBP16.27■□□□□ 0.2
ITGA4-210ENST00000484404 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 SLC5A4Q9NY91 659 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 FEM1BQ9UK73 627 aa16.27■□□□□ 0.2
ITGA4-210ENST00000484404 IGHA2P01877 340 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 SLC1A4P43007 532 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
ITGA4-210ENST00000484404 ALX1Q15699 326 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 LRRC26Q2I0M4 334 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 CCDC174Q6PII3 467 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 ABRAQ8N0Z2 381 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
ITGA4-210ENST00000484404 DIAPH3Q9NSV4 1193 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
ITGA4-210ENST00000484404 NEDD4P46934 1319 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 COL6A1P12109 1028 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 CAPN2P17655 700 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 FXR1P51114 621 aaKnown RBP eCLIP16.25■□□□□ 0.19
ITGA4-210ENST00000484404 STAT2P52630 851 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 ZNF792Q3KQV3 632 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
ITGA4-210ENST00000484404 FRMPD2Q68DX3 1309 aaPredicted RBP16.24■□□□□ 0.19
ITGA4-210ENST00000484404 ORC4O43929 436 aa16.24■□□□□ 0.19
ITGA4-210ENST00000484404 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
ITGA4-210ENST00000484404 ZKSCAN3Q9BRR0 538 aa16.24■□□□□ 0.19
ITGA4-210ENST00000484404 TINF2Q9BSI4 451 aa16.24■□□□□ 0.19
ITGA4-210ENST00000484404 OSBPL3Q9H4L5 887 aa16.24■□□□□ 0.19
ITGA4-210ENST00000484404 ZMYM6O95789 1325 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 SEPT4O43236 478 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 MSCO60682 206 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 COPB2P35606 906 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 TTBK2Q6IQ55 1244 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 IL25Q9H293 177 aa16.23■□□□□ 0.19
ITGA4-210ENST00000484404 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
ITGA4-210ENST00000484404 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 ALAS1P13196 640 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 GSPT1P15170 499 aaKnown RBP16.22■□□□□ 0.19
ITGA4-210ENST00000484404 SLC16A2P36021 539 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 ANKRD35Q8N283 1001 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 GPCPD1Q9NPB8 672 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
ITGA4-210ENST00000484404 SYNPO2Q9UMS6 1093 aa16.22■□□□□ 0.19
ITGA4-210ENST00000484404 DDX49Q9Y6V7 483 aaKnown RBP16.22■□□□□ 0.19
ITGA4-210ENST00000484404 ZNF536O15090 1300 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 FGRP09769 529 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 MFAP1P55081 439 aaKnown RBP16.21■□□□□ 0.19
ITGA4-210ENST00000484404 CNTN2Q02246 1040 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 AKNAD1Q5T1N1 836 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 RCSD1Q6JBY9 416 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 RNF146Q9NTX7 359 aa16.21■□□□□ 0.19
ITGA4-210ENST00000484404 PRR12Q9ULL5 1215 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms