RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 C1orf53Q5VUE5 145 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 TMEM39AQ9NV64 488 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 PHF24Q9UPV7 400 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
CPSF4-213ENST00000484112 RLFQ13129 1914 aa11.9□□□□□ -0.51
CPSF4-213ENST00000484112 SMIM22K7EJ46 135 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
CPSF4-213ENST00000484112 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
CPSF4-213ENST00000484112 STAT3P40763 770 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 SLC4A3P48751 1232 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 CDK8P49336 464 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 LENG1Q96BZ8 264 aaPredicted RBP11.89□□□□□ -0.51
CPSF4-213ENST00000484112 CCDC17Q96LX7 622 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 TINF2Q9BSI4 451 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 ZNF287Q9HBT7 754 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 FBXO28Q9NVF7 368 aa11.89□□□□□ -0.51
CPSF4-213ENST00000484112 A0A1W2PQ45 241 aaPredicted RBP11.88□□□□□ -0.51
CPSF4-213ENST00000484112 A0A1W2PQY0 241 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 GSG1L2A8MUP6 293 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 USP17L12C9JPN9 530 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 USP17L21D6R901 530 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 AKR1A1P14550 325 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 FPGSQ05932 587 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 ZNF792Q3KQV3 632 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 MCMDC2Q4G0Z9 681 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 FAM83BQ5T0W9 1011 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 RIOX2Q8IUF8 465 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 RILPL2Q969X0 211 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 STARD7Q9NQZ5 370 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 NRBP1Q9UHY1 535 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 ROBO3Q96MS0 1386 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 ZNF236Q9UL36 1845 aa11.88□□□□□ -0.51
CPSF4-213ENST00000484112 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 M0R2C6 588 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 VWA5AO00534 786 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 KIAA0355O15063 1070 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 CHGBP05060 677 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 SLC3A2P08195 630 aaKnown RBP11.87□□□□□ -0.51
CPSF4-213ENST00000484112 ZNF865P0CJ78 1059 aaPredicted RBP11.87□□□□□ -0.51
CPSF4-213ENST00000484112 SDSP20132 328 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 PDE4AP27815 886 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 NT5C2P49902 561 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 C16orf86Q6ZW13 317 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 STK11IPQ8N1F8 1099 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 KANSL2Q9H9L4 492 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
CPSF4-213ENST00000484112 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-213ENST00000484112 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-213ENST00000484112 APPP05067 770 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 TDO2P48775 406 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 ACLYP53396 1101 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 FAAP100Q0VG06 881 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 ALX1Q15699 326 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 IFNL3Q8IZI9 196 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 PPM1EQ8WY54 764 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
CPSF4-213ENST00000484112 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 CCDC136Q96JN2 1154 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 NAPBQ9H115 298 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 ZHX1Q9UKY1 873 aaPredicted RBP11.86□□□□□ -0.51
CPSF4-213ENST00000484112 FAM184BQ9ULE4 1060 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 ADAMTS5Q9UNA0 930 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 DIS3Q9Y2L1 958 aaKnown RBP11.86□□□□□ -0.51
CPSF4-213ENST00000484112 A0A0G2JMZ2 1700 aa11.86□□□□□ -0.51
CPSF4-213ENST00000484112 TMEM265A0A087WTH1 108 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 ADAMTS4O75173 837 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 DNAJB2P25686 324 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 KCNA10Q16322 511 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 CPXCR1Q8N123 301 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 NUP133Q8WUM0 1156 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 SEC62Q99442 399 aaKnown RBP11.85□□□□□ -0.51
CPSF4-213ENST00000484112 NUP88Q99567 741 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-213ENST00000484112 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 ZNF214Q9UL59 606 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-213ENST00000484112 CTDP1Q9Y5B0 961 aaPredicted RBP11.85□□□□□ -0.51
CPSF4-213ENST00000484112 SMCHD1A6NHR9 2005 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 CUL9Q8IWT3 2517 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 CCDC171Q6TFL3 1326 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 RAD50Q92878 1312 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 SYNRGQ9UMZ2 1314 aa11.85□□□□□ -0.51
CPSF4-213ENST00000484112 MYADML2A6NDP7 307 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 PCP11498 1178 aaKnown RBP11.84□□□□□ -0.51
CPSF4-213ENST00000484112 COPB2P35606 906 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
CPSF4-213ENST00000484112 PDE4BQ07343 736 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
CPSF4-213ENST00000484112 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 SNRNP48Q6IEG0 339 aaKnown RBP11.84□□□□□ -0.51
CPSF4-213ENST00000484112 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 ANKRD33Q7Z3H0 272 aa11.84□□□□□ -0.51
CPSF4-213ENST00000484112 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms