RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MYPNQ86TC9 1320 aa8.12□□□□□ -1.11
BRCA1-216ENST00000484087 HAND2P61296 217 aa8.12□□□□□ -1.11
BRCA1-216ENST00000484087 IRX3P78415 501 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-216ENST00000484087 E2F4Q16254 413 aa8.12□□□□□ -1.11
BRCA1-216ENST00000484087 NUP88Q99567 741 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-216ENST00000484087 NAPBQ9H115 298 aa8.12□□□□□ -1.11
BRCA1-216ENST00000484087 RPAP3Q9H6T3 665 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-216ENST00000484087 ZCCHC17Q9NP64 241 aaKnown RBP8.12□□□□□ -1.11
BRCA1-216ENST00000484087 CABP5Q9NP86 173 aa8.12□□□□□ -1.11
BRCA1-216ENST00000484087 SMC3Q9UQE7 1217 aa8.12□□□□□ -1.11
BRCA1-216ENST00000484087 PATL2C9JE40 543 aaKnown RBP8.11□□□□□ -1.11
BRCA1-216ENST00000484087 NMT2O60551 498 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 CNMDO75829 334 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 CYP21A2P08686 494 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 EEF2P13639 858 aaKnown RBP8.11□□□□□ -1.11
BRCA1-216ENST00000484087 ELNP15502 786 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 HERVK_113P62684 666 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 PPARAQ07869 468 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-216ENST00000484087 Q3C1V9 767 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 TMED8Q6PL24 325 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-216ENST00000484087 USP17L2Q6R6M4 530 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 TMEM179Q6ZVK1 233 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 AMOTL1Q8IY63 956 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 ZNF687Q8N1G0 1237 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
BRCA1-216ENST00000484087 PORCNQ9H237 461 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 FBXO28Q9NVF7 368 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 SWAP70Q9UH65 585 aa8.11□□□□□ -1.11
BRCA1-216ENST00000484087 KIAA0100Q14667 2235 aaKnown RBP8.1□□□□□ -1.11
BRCA1-216ENST00000484087 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-216ENST00000484087 ZNF213O14771 459 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 TNPO2O14787 897 aaKnown RBP8.1□□□□□ -1.11
BRCA1-216ENST00000484087 CPA1P15085 419 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 GNAT2P19087 354 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 TRIM32Q13049 653 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 TRDNQ13061 729 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 KIF22Q14807 665 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 MTFR1Q15390 333 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 SBK1Q52WX2 424 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 CLEC17AQ6ZS10 378 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 DHX32Q7L7V1 743 aaKnown RBP8.1□□□□□ -1.11
BRCA1-216ENST00000484087 TANGO6Q9C0B7 1094 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 NBPF3Q9H094 633 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 KIAA1683Q9H0B3 1180 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 BTBD7Q9P203 1132 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 RBPJLQ9UBG7 517 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 SRRDQ9UH36 339 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 PNMA3Q9UL41 463 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 MTMR7Q9Y216 660 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 SLC45A1Q9Y2W3 748 aa8.1□□□□□ -1.11
BRCA1-216ENST00000484087 FRMPD3Q5JV73 1810 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 C19orf81C9J6K1 198 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 TAL1P17542 331 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-216ENST00000484087 PDCP20941 246 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 FLT3LGP49771 235 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 FCGRTP55899 365 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 FAM110CQ1W6H9 321 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 SLC9C1Q4G0N8 1177 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.11
BRCA1-216ENST00000484087 WDR78Q5VTH9 848 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 GPR153Q6NV75 609 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 RALYLQ86SE5 291 aaKnown RBP8.09□□□□□ -1.11
BRCA1-216ENST00000484087 TBC1D10CQ8IV04 446 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 CEP95Q96GE4 821 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 C12orf42Q96LP6 360 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 ATP6V1DQ9Y5K8 247 aa8.09□□□□□ -1.11
BRCA1-216ENST00000484087 NEDD4P46934 1319 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 E7EWF7 191 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 BAG4O95429 457 aaKnown RBP8.08□□□□□ -1.12
BRCA1-216ENST00000484087 FGAP02671 866 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 EN2P19622 333 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-216ENST00000484087 HOXA7P31268 230 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-216ENST00000484087 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 ERVK-24P63145 666 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 PKN2Q16513 984 aaKnown RBP8.08□□□□□ -1.12
BRCA1-216ENST00000484087 FAM83BQ5T0W9 1011 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 CATSPERGQ6ZRH7 1159 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 Q6ZUG5 572 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 CCDC83Q8IWF9 413 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 NCOA7Q8NI08 942 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 RAET1EQ8TD07 263 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 ZNF333Q96JL9 665 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 VCPKMTQ9H867 229 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 ARHGEF10LQ9HCE6 1279 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 TOMM22Q9NS69 142 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 PLXNA1Q9UIW2 1896 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.08□□□□□ -1.12
BRCA1-216ENST00000484087 TMX2Q9Y320 296 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 KIF3AQ9Y496 699 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 SMCHD1A6NHR9 2005 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 DNAH12Q6ZR08 3092 aa8.08□□□□□ -1.12
BRCA1-216ENST00000484087 IGKV6D-41A0A0C4DH26 115 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L15C9J2P7 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L13C9JLJ4 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L11C9JVI0 530 aa8.07□□□□□ -1.12
BRCA1-216ENST00000484087 USP17L18D6R9N7 530 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms