RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 SLC6A14Q9UN76 642 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 SPEF2Q9C093 1822 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 PIK3R2O00459 728 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 PSAPP07602 524 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 HOXB7P09629 217 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 SREBF2Q12772 1141 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 NBPF9Q3BBW0 867 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 C8orf34Q49A92 452 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 KANK3Q6NY19 840 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 FBXO46Q6PJ61 603 aaPredicted RBP7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 ANKRD18AQ8IVF6 992 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 JARID2Q92833 1246 aaPredicted RBP7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 MYD88Q99836 296 aa7.73□□□□□ -1.17
SEMA3D-204ENST00000484038 XDHP47989 1333 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 HTTP42858 3142 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 M0R082 166 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 PDE8AO60658 829 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 CPB1P15086 417 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 DGKGP49619 791 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 TRIM28Q13263 835 aaKnown RBP7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 PRKG1Q13976 671 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 PCSK7Q16549 785 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 DUSP27Q5VZP5 1158 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 FAM35AQ86V20 835 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 ZNF417Q8TAU3 575 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 ZNF587Q96SQ5 575 aaPredicted RBP7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 GMLQ99445 158 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 MXD3Q9BW11 206 aa7.72□□□□□ -1.17
SEMA3D-204ENST00000484038 MKI67P46013 3256 aaKnown RBP7.71□□□□□ -1.17
SEMA3D-204ENST00000484038 WNT10BO00744 389 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 FKTNO75072 461 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 SASH1O94885 1247 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 MAP3K6O95382 1288 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 ALBP02768 609 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 TM4SF4P48230 202 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 HFE2Q6ZVN8 426 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 ZNF438Q7Z4V0 828 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 NUDT8Q8WV74 236 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 GCC1Q96CN9 775 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 NSUN5Q96P11 429 aaKnown RBP7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 JPH1Q9HDC5 661 aaPredicted RBP7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 CWC25Q9NXE8 425 aaPredicted RBP7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 CENPFP49454 3210 aa7.71□□□□□ -1.18
SEMA3D-204ENST00000484038 WTIPA6NIX2 430 aaPredicted RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 GNB5O14775 395 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 MMP20O60882 483 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 PDGFAP04085 211 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 PCCAP05165 728 aaPredicted RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 RPLP1P05386 114 aaKnown RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 EIF2AK2P19525 551 aaKnown RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 PLAURQ03405 335 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 WDR43Q15061 677 aaKnown RBP eCLIP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 DACT2Q5SW24 774 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 TTC39BQ5VTQ0 682 aaPredicted RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 PSAPL1Q6NUJ1 521 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 C8orf86Q6ZUL3 223 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 ARMC9Q7Z3E5 817 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 CCDC191Q8NCU4 936 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 RUNDC1Q96C34 613 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 CDC5LQ99459 802 aaKnown RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 MDFIQ99750 246 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 R3HDMLQ9H3Y0 253 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 TLR7Q9NYK1 1049 aaKnown RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 EGFL7Q9UHF1 273 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 POLIQ9UNA4 740 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 ZNF646O15015 1829 aaPredicted RBP7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 MED23Q9ULK4 1368 aa7.7□□□□□ -1.18
SEMA3D-204ENST00000484038 ELL2O00472 640 aaPredicted RBP7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 ICMTO60725 284 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 BRD1O95696 1058 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 MZF1P28698 734 aaPredicted RBP7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 CTSWP56202 376 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 KCNMA1Q12791 1236 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 NAGPAQ9UK23 515 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 ANGEL1Q9UNK9 670 aaKnown RBP7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 FZD1Q9UP38 647 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 TRIM17Q9Y577 477 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 MYO3BQ8WXR4 1341 aa7.69□□□□□ -1.18
SEMA3D-204ENST00000484038 A6NHS1 94 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 LILRB5O75023 590 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 DDX58O95786 925 aaKnown RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 GHRHP01286 108 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 CCT4P50991 539 aaKnown RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 GPLD1P80108 840 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 RALBP1Q15311 655 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 STRIP1Q5VSL9 837 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 ELMSAN1Q6PJG2 1045 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 KIAA0825Q8IV33 1275 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 GREM2Q9H772 168 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 MINPP1Q9UNW1 487 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 STARD13Q9Y3M8 1113 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 MYH3P11055 1940 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 MANSC4A6NHS7 340 aaPredicted RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 ZBTB42B2RXF5 422 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 RGS9O75916 674 aaPredicted RBP7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 GDF11O95390 407 aa7.68□□□□□ -1.18
SEMA3D-204ENST00000484038 COL1A1P02452 1464 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms