RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 GRB10Q13322 594 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 CLEC16AQ2KHT3 1053 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 TKFCQ3LXA3 575 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 YOD1Q5VVQ6 348 aaPredicted RBP10.85□□□□□ -0.67
MCF2-207ENST00000483690 SCUBE1Q8IWY4 988 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 ZDHHC15Q96MV8 337 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 DHRS4Q9BTZ2 278 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 METTL22Q9BUU2 404 aaPredicted RBP10.85□□□□□ -0.67
MCF2-207ENST00000483690 HMGB1P09429 215 aaKnown RBP10.84□□□□□ -0.67
MCF2-207ENST00000483690 GYS2P54840 703 aa10.84□□□□□ -0.67
MCF2-207ENST00000483690 PLA2G4EQ3MJ16 856 aa10.84□□□□□ -0.67
MCF2-207ENST00000483690 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
MCF2-207ENST00000483690 BTN2A2Q8WVV5 523 aa10.84□□□□□ -0.67
MCF2-207ENST00000483690 EXOC2Q96KP1 924 aa10.84□□□□□ -0.67
MCF2-207ENST00000483690 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
MCF2-207ENST00000483690 MEIS1O00470 390 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 PPP1R12AO14974 1030 aaPredicted RBP10.83□□□□□ -0.68
MCF2-207ENST00000483690 GSC2O15499 205 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 PRODHO43272 600 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 PABPC1P11940 636 aaKnown RBP10.83□□□□□ -0.68
MCF2-207ENST00000483690 HSP90B1P14625 803 aaKnown RBP10.83□□□□□ -0.68
MCF2-207ENST00000483690 GRIA2P42262 883 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 NSMFQ6X4W1 530 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 ENOX1Q8TC92 643 aaKnown RBP10.83□□□□□ -0.68
MCF2-207ENST00000483690 OSBPL1AQ9BXW6 950 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 MRPS23Q9Y3D9 190 aaKnown RBP10.83□□□□□ -0.68
MCF2-207ENST00000483690 PRKAB1Q9Y478 270 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 CD2APQ9Y5K6 639 aa10.83□□□□□ -0.68
MCF2-207ENST00000483690 WDR64B1ANS9 1081 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 GDF11O95390 407 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 CWF19L1Q69YN2 538 aaKnown RBP10.82□□□□□ -0.68
MCF2-207ENST00000483690 GTF2IRD2BQ6EKJ0 949 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 GTF2IRD2Q86UP8 949 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 KISS1RQ969F8 398 aaPredicted RBP10.82□□□□□ -0.68
MCF2-207ENST00000483690 IER2Q9BTL4 223 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 GPR62Q9BZJ7 368 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 TMX1Q9H3N1 280 aa10.82□□□□□ -0.68
MCF2-207ENST00000483690 SHISA3A0PJX4 238 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 CAPNS1P04632 268 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 ITIH2P19823 946 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 GSK3AP49840 483 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
MCF2-207ENST00000483690 AMPD2Q01433 879 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 FILIP1Q7Z7B0 1213 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 GPATCH2Q9NW75 528 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 MINPP1Q9UNW1 487 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 PLAAQ9Y263 795 aa10.81□□□□□ -0.68
MCF2-207ENST00000483690 H0Y8X5 98 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 IGLV1-40P01703 118 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 GSNP06396 782 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 H2AFB1P0C5Y9 115 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 H2AFB2P0C5Z0 115 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 OXCT1P55809 520 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 CPSF6Q16630 551 aaKnown RBP eCLIP10.8□□□□□ -0.68
MCF2-207ENST00000483690 TMEM151AQ8N4L1 468 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 DAGLBQ8NCG7 672 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 SHKBP1Q8TBC3 707 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 OSBP2Q969R2 916 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 HDAC8Q9BY41 377 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 TRIT1Q9H3H1 467 aaKnown RBP10.8□□□□□ -0.68
MCF2-207ENST00000483690 MKNK2Q9HBH9 465 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 NCOA5Q9HCD5 579 aaKnown RBP10.8□□□□□ -0.68
MCF2-207ENST00000483690 LRRC4CQ9HCJ2 640 aa10.8□□□□□ -0.68
MCF2-207ENST00000483690 PPM1GO15355 546 aaPredicted RBP10.79□□□□□ -0.68
MCF2-207ENST00000483690 DNAJC6O75061 913 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 VAMP4O75379 141 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 FSTP19883 344 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 HOXC12P31275 282 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 KCNJ6P48051 423 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 POU4F1Q01851 419 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 CDKAL1Q5VV42 579 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 ZNF655Q8N720 491 aaPredicted RBP10.79□□□□□ -0.68
MCF2-207ENST00000483690 FAM181AQ8N9Y4 354 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 KCTD13Q8WZ19 329 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 SPC25Q9HBM1 224 aa10.79□□□□□ -0.68
MCF2-207ENST00000483690 GPR55Q9Y2T6 319 aaPredicted RBP10.79□□□□□ -0.68
MCF2-207ENST00000483690 DNAJC25-GNG10A0A024R161 153 aa10.78□□□□□ -0.68
MCF2-207ENST00000483690 PLD2O14939 933 aa10.78□□□□□ -0.68
MCF2-207ENST00000483690 ITGB2P05107 769 aa10.78□□□□□ -0.68
MCF2-207ENST00000483690 SNRPB2P08579 225 aaKnown RBP10.78□□□□□ -0.68
MCF2-207ENST00000483690 DOC2BQ14184 412 aa10.78□□□□□ -0.68
MCF2-207ENST00000483690 C21orf62-AS1Q17RA5 79 aa10.78□□□□□ -0.68
MCF2-207ENST00000483690 DALRD3Q5D0E6 543 aaKnown RBP10.78□□□□□ -0.68
MCF2-207ENST00000483690 CYP26B1Q9NR63 512 aa10.78□□□□□ -0.68
MCF2-207ENST00000483690 SRFP11831 508 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 CTSKP43235 329 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 GFRA1P56159 465 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 CBX2Q14781 532 aaPredicted RBP10.77□□□□□ -0.69
MCF2-207ENST00000483690 PTPROQ16827 1216 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 DPY19L1Q2PZI1 675 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 CRTC3Q6UUV7 619 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 ANKRD13AQ8IZ07 590 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 DUSP15Q9H1R2 295 aaPredicted RBP10.77□□□□□ -0.69
MCF2-207ENST00000483690 IFT57Q9NWB7 429 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 ST14Q9Y5Y6 855 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 U3KQE9 123 aa10.77□□□□□ -0.69
MCF2-207ENST00000483690 DLX3O60479 287 aa10.76□□□□□ -0.69
MCF2-207ENST00000483690 RAPGEF3O95398 923 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms