RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 SMCR8Q8TEV9 937 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-207ENST00000483407 COL26A1Q96A83 441 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 MRGPRX2Q96LB1 330 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
CSDE1-207ENST00000483407 RNF208Q9H0X6 261 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 ABCF2Q9UG63 623 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 AKAP2Q9Y2D5 859 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 SLC45A1Q9Y2W3 748 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 SZT2Q5T011 3432 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 GAKO14976 1311 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 ADGRA2Q96PE1 1338 aa7.25□□□□□ -1.25
CSDE1-207ENST00000483407 RBBP6Q7Z6E9 1792 aaKnown RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 A0A0G2JLL6 359 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 PHF20L1A8MW92 1017 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 CTNND1O60716 968 aaKnown RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 LGR5O75473 907 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 NR3C2P08235 984 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 CAPN2P17655 700 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 PTPRAP18433 802 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 ERCC3P19447 782 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 IGFBP4P22692 258 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 EPHA4P54764 986 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 PICALMQ13492 652 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 MVPQ14764 893 aaKnown RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 TREML4Q6UXN2 200 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 DNAJC14Q6Y2X3 702 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 GADL1Q6ZQY3 521 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 PRRT2Q7Z6L0 340 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 ZFPM1Q8IX07 1006 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 SHISA4Q96DD7 197 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 ETNK1Q9HBU6 452 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 COPRSQ9NQ92 184 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 PA2G4Q9UQ80 394 aaKnown RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 NR2E3Q9Y5X4 410 aa7.24□□□□□ -1.25
CSDE1-207ENST00000483407 PDS5AQ29RF7 1337 aaKnown RBP7.24□□□□□ -1.25
CSDE1-207ENST00000483407 ATRNL1Q5VV63 1379 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 A0A1B0GUL7 405 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 TRIM75PA6NK02 468 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 DLL1O00548 723 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 TNPO2O14787 897 aaKnown RBP7.23□□□□□ -1.25
CSDE1-207ENST00000483407 ADCY3O60266 1144 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 FARP2O94887 1054 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-207ENST00000483407 STAU1O95793 577 aaKnown RBP7.23□□□□□ -1.25
CSDE1-207ENST00000483407 LDHCP07864 332 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 GNAI3P08754 354 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 ADORA1P30542 326 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 ADD1P35611 737 aaKnown RBP7.23□□□□□ -1.25
CSDE1-207ENST00000483407 BTDP43251 543 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 GSTO1P78417 241 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 MAP3K10Q02779 954 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 RASGRF1Q13972 1273 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 CYP2U1Q7Z449 544 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 U2AF1L4Q8WU68 220 aaKnown RBP7.23□□□□□ -1.25
CSDE1-207ENST00000483407 COA7Q96BR5 231 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 KRTAP4-6Q9BYQ5 205 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 NOB1Q9ULX3 412 aaKnown RBP7.23□□□□□ -1.25
CSDE1-207ENST00000483407 AGTPBP1Q9UPW5 1226 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 AFG3L2Q9Y4W6 797 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 MROH7-TTC4A0A0A0MT08 1334 aa7.23□□□□□ -1.25
CSDE1-207ENST00000483407 DDTLA6NHG4 134 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 SRGAP3O43295 1099 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 ICMTO60725 284 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 SGPL1O95470 568 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 MAP4K4O95819 1239 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 FLT3LGP49771 235 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 TIMM10P62072 90 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 PABPC4Q13310 644 aaKnown RBP eCLIP7.22□□□□□ -1.255e-35■□□□□ 9.5
CSDE1-207ENST00000483407 FAM110CQ1W6H9 321 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 GORABQ5T7V8 394 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 UBE2Q1Q7Z7E8 422 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 GTF3C2Q8WUA4 911 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 XAGE2Q96GT9 111 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 NEUROD6Q96NK8 337 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 PURBQ96QR8 312 aaKnown RBP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 MEIS3Q99687 375 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 OSBPL5Q9H0X9 879 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 DDX4Q9NQI0 724 aaKnown RBP7.22□□□□□ -1.25
CSDE1-207ENST00000483407 PGPEP1Q9NXJ5 209 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 SEPT3Q9UH03 358 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 GABRQQ9UN88 632 aa7.22□□□□□ -1.25
CSDE1-207ENST00000483407 RFX7Q2KHR2 1363 aa7.21□□□□□ -1.25
CSDE1-207ENST00000483407 GPR75-ASB3A0A0A6YYF3 556 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 ABL1P00519 1130 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 TFRCP02786 760 aaKnown RBP7.21□□□□□ -1.26
CSDE1-207ENST00000483407 ELNP15502 786 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 GCLCP48506 637 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-207ENST00000483407 RHBDL3P58872 404 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 FOXK2Q01167 660 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 MECOMQ03112 1051 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 TFCP2Q12800 502 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 ECM1Q16610 540 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 CAPN12Q6ZSI9 719 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 ANKRD13CQ8N6S4 541 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 SPATA5Q8NB90 893 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 ZNF280CQ8ND82 737 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 ARHGAP45Q92619 1136 aa7.21□□□□□ -1.26
CSDE1-207ENST00000483407 NOL10Q9BSC4 688 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 375.7 ms