RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 MICU3Q86XE3 530 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 SNX21Q969T3 373 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 NUP88Q99567 741 aaPredicted RBP17.84■□□□□ 0.45
CCM2-215ENST00000482714 RIOX1Q9H6W3 641 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 GPCPD1Q9NPB8 672 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 HPS5Q9UPZ3 1129 aa17.84■□□□□ 0.45
CCM2-215ENST00000482714 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 TLR2O60603 784 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 OAZ1P54368 228 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 HERVK_113P62684 666 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.45
CCM2-215ENST00000482714 TAF1CQ15572 869 aaPredicted RBP17.83■□□□□ 0.45
CCM2-215ENST00000482714 STAG2Q8N3U4 1231 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 BEGAINQ9BUH8 593 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 SPZ1Q9BXG8 430 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 PRR12Q9ULL5 1215 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 NAP1L2Q9ULW6 460 aaPredicted RBP17.83■□□□□ 0.45
CCM2-215ENST00000482714 RABGAP1Q9Y3P9 1069 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 LOC285556D6RIA3 1793 aa17.83■□□□□ 0.45
CCM2-215ENST00000482714 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.44
CCM2-215ENST00000482714 ZBED4O75132 1171 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 NOM1Q5C9Z4 860 aaKnown RBP17.82■□□□□ 0.44
CCM2-215ENST00000482714 SYDE2Q5VT97 1194 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 TTBK2Q6IQ55 1244 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 SMCR8Q8TEV9 937 aaPredicted RBP17.82■□□□□ 0.44
CCM2-215ENST00000482714 MYL10Q9BUA6 226 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
CCM2-215ENST00000482714 RNF186Q9NXI6 227 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
CCM2-215ENST00000482714 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
CCM2-215ENST00000482714 SPDYE16A6NNV3 312 aaPredicted RBP17.82■□□□□ 0.44
CCM2-215ENST00000482714 VWA5AO00534 786 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 ATP2A1O14983 1001 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 ME3Q16798 604 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 TMTC3Q6ZXV5 915 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 MTMR8Q96EF0 704 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 SLC38A10Q9HBR0 1119 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
CCM2-215ENST00000482714 CPLX1O14810 134 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 CDKL5O76039 1030 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 CYP2C8P10632 490 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 IFNAR1P17181 557 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 RXRAP19793 462 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
CCM2-215ENST00000482714 ADGRF4Q8IZF3 695 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 MAF1Q9H063 256 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 RANBP17Q9H2T7 1088 aaKnown RBP17.81■□□□□ 0.44
CCM2-215ENST00000482714 WBP1LQ9NX94 342 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 RBPJLQ9UBG7 517 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 MORF4L1Q9UBU8 362 aa17.81■□□□□ 0.44
CCM2-215ENST00000482714 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
CCM2-215ENST00000482714 CDC27P30260 824 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 COPB2P35606 906 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 SLC16A2P36021 539 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 CCT2P78371 535 aaKnown RBP17.8■□□□□ 0.44
CCM2-215ENST00000482714 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 SRBD1Q8N5C6 995 aaKnown RBP17.8■□□□□ 0.44
CCM2-215ENST00000482714 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
CCM2-215ENST00000482714 LLPHQ9BRT6 129 aaKnown RBP17.8■□□□□ 0.44
CCM2-215ENST00000482714 JMJD4Q9H9V9 463 aa17.8■□□□□ 0.44
CCM2-215ENST00000482714 CYTH3O43739 400 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 CCNA1P78396 465 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 SCRN1Q12765 414 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 NTRK3Q16288 839 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 FAM110CQ1W6H9 321 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 GPRC5AQ8NFJ5 357 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 ATG4CQ96DT6 458 aa17.79■□□□□ 0.44
CCM2-215ENST00000482714 RRP36Q96EU6 259 aaKnown RBP17.79■□□□□ 0.44
CCM2-215ENST00000482714 THSD7BQ9C0I4 1608 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 PNMA6FA0A0J9YX94 578 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 ZBTB5O15062 677 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 PRPF3O43395 683 aaKnown RBP17.78■□□□□ 0.44
CCM2-215ENST00000482714 TRPA1O75762 1119 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 HSPA1AP0DMV8 641 aaKnown RBP17.78■□□□□ 0.44
CCM2-215ENST00000482714 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
CCM2-215ENST00000482714 FUT2Q10981 343 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 CRHR2Q13324 411 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 RASGRP2Q7LDG7 609 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 REPS2Q8NFH8 660 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 RNF26Q9BY78 433 aaPredicted RBP17.78■□□□□ 0.44
CCM2-215ENST00000482714 VAT1LQ9HCJ6 419 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 ADGRA2Q96PE1 1338 aa17.78■□□□□ 0.44
CCM2-215ENST00000482714 PLEKHA8P1O95397 391 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 SLC25A27O95847 323 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 BCRP11274 1271 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 STAT3P40763 770 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 AKAP17AQ02040 695 aaKnown RBP17.77■□□□□ 0.44
CCM2-215ENST00000482714 STK3Q13188 491 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 TKFCQ3LXA3 575 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 NBPF11Q86T75 865 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 RAB11FIP4Q86YS3 637 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 TRIM22Q8IYM9 498 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 TMX3Q96JJ7 454 aa17.77■□□□□ 0.44
CCM2-215ENST00000482714 TEX13BQ9BXU2 312 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms