RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ZNF16P17020 682 aaPredicted RBP8.92□□□□□ -0.98
CLK1-212ENST00000482590 SULF2Q8IWU5 870 aa8.92□□□□□ -0.98
CLK1-212ENST00000482590 TOP6BLQ8N6T0 577 aa8.92□□□□□ -0.98
CLK1-212ENST00000482590 UBXN4Q92575 508 aa8.92□□□□□ -0.98
CLK1-212ENST00000482590 RBCK1Q9BYM8 510 aa8.92□□□□□ -0.98
CLK1-212ENST00000482590 KIAA0232Q92628 1395 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 SPATA31A5Q5VU36 1347 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 SPATA31A7Q8IWB4 1347 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 TMEM265A0A087WTH1 108 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 ARHGAP27Q6ZUM4 889 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 HEXIM2Q96MH2 286 aaKnown RBP8.91□□□□□ -0.98
CLK1-212ENST00000482590 RGPD3A6NKT7 1758 aaPredicted RBP8.91□□□□□ -0.98
CLK1-212ENST00000482590 RGPD4Q7Z3J3 1758 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 PIK3C2AO00443 1686 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 LRRC37A3O60309 1634 aa8.91□□□□□ -0.98
CLK1-212ENST00000482590 PPIP5K1Q6PFW1 1433 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 POLR3AO14802 1390 aaPredicted RBP8.9□□□□□ -0.98
CLK1-212ENST00000482590 FARP2O94887 1054 aaPredicted RBP8.9□□□□□ -0.98
CLK1-212ENST00000482590 ITIH2P19823 946 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 ARNTP27540 789 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 ERVK-24P63145 666 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 MAP1SQ66K74 1059 aaPredicted RBP8.9□□□□□ -0.98
CLK1-212ENST00000482590 FAM214BQ7L5A3 538 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.9□□□□□ -0.98
CLK1-212ENST00000482590 RNF214Q8ND24 703 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 TMEM40Q8WWA1 233 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 BCO2Q9BYV7 579 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 TNKS2Q9H2K2 1166 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 SSU72Q9NP77 194 aaKnown RBP8.9□□□□□ -0.98
CLK1-212ENST00000482590 NLRP2Q9NX02 1062 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 PPP4R2Q9NY27 417 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 MON2Q7Z3U7 1717 aa8.9□□□□□ -0.98
CLK1-212ENST00000482590 DISP2A7MBM2 1401 aa8.89□□□□□ -0.99
CLK1-212ENST00000482590 SSH2Q76I76 1423 aa8.89□□□□□ -0.99
CLK1-212ENST00000482590 LTN1O94822 1766 aa8.89□□□□□ -0.99
CLK1-212ENST00000482590 ACEP12821 1306 aa8.89□□□□□ -0.99
CLK1-212ENST00000482590 XRCC5P13010 732 aaKnown RBP8.89□□□□□ -0.99
CLK1-212ENST00000482590 CDK19Q9BWU1 502 aa8.89□□□□□ -0.99
CLK1-212ENST00000482590 SPATA31A1Q5TZJ5 1347 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 CENPJQ9HC77 1338 aaPredicted RBP8.88□□□□□ -0.99
CLK1-212ENST00000482590 ZC3H6P61129 1189 aaKnown RBP8.88□□□□□ -0.99
CLK1-212ENST00000482590 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 CHRNA2Q15822 529 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 ANGEL2Q5VTE6 544 aaKnown RBP8.88□□□□□ -0.99
CLK1-212ENST00000482590 GPBAR1Q8TDU6 330 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 PSMD1Q99460 953 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 CAMTA1Q9Y6Y1 1673 aa8.88□□□□□ -0.99
CLK1-212ENST00000482590 COL18A1P39060 1754 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 SLIT3O75094 1523 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 ANKRD62A6NC57 917 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 DBX1A6NMT0 343 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 NME2P22392 152 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 TAF7LQ5H9L4 462 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 SLC23A3Q6PIS1 610 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 MPRIPQ6WCQ1 1025 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 CACNA2D2Q9NY47 1150 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 SNX11Q9Y5W9 270 aa8.87□□□□□ -0.99
CLK1-212ENST00000482590 PEAK1Q9H792 1746 aa8.86□□□□□ -0.99
CLK1-212ENST00000482590 USP54Q70EL1 1684 aa8.86□□□□□ -0.99
CLK1-212ENST00000482590 COL5A2P05997 1499 aaPredicted RBP8.86□□□□□ -0.99
CLK1-212ENST00000482590 NXPE4Q6UWF7 544 aa8.86□□□□□ -0.99
CLK1-212ENST00000482590 TMC7Q7Z402 723 aa8.86□□□□□ -0.99
CLK1-212ENST00000482590 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
CLK1-212ENST00000482590 PRDM7Q9NQW5 492 aa8.86□□□□□ -0.99
CLK1-212ENST00000482590 BRD4O60885 1362 aaPredicted RBP8.86□□□□□ -0.99
CLK1-212ENST00000482590 CPDO75976 1380 aa8.86□□□□□ -0.99
CLK1-212ENST00000482590 USP19O94966 1318 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 VAMP1P23763 118 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 NTF4P34130 210 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 EVA1CP58658 441 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 NBPF8Q3BBV2 869 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 LCE4AQ5TA78 99 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 BCL2L13Q9BXK5 485 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 EMILIN2Q9BXX0 1053 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 USP6P35125 1406 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 KAT6BQ8WYB5 2073 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 PARD3Q8TEW0 1356 aa8.85□□□□□ -0.99
CLK1-212ENST00000482590 CRB1P82279 1406 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 SF3A1Q15459 793 aaKnown RBP8.84□□□□□ -0.99
CLK1-212ENST00000482590 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.84□□□□□ -0.99
CLK1-212ENST00000482590 PPM1JQ5JR12 505 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 FAM196AQ6ZSG2 479 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 UBE3DQ7Z6J8 389 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 KSR1Q8IVT5 923 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 SPACA3Q8IXA5 215 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 C3orf58Q8NDZ4 430 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 CSADQ9Y600 493 aa8.84□□□□□ -0.99
CLK1-212ENST00000482590 OVOS2A0A0G2JMS6 1433 aa8.83□□□□□ -1
CLK1-212ENST00000482590 OVOS2A0A0J9YW53 1432 aa8.83□□□□□ -1
CLK1-212ENST00000482590 OVOS2Q6IE36 1432 aa8.83□□□□□ -1
CLK1-212ENST00000482590 IGF2BP3O00425 579 aaKnown RBP eCLIP8.83□□□□□ -1
CLK1-212ENST00000482590 TRIM37O94972 964 aa8.83□□□□□ -1
CLK1-212ENST00000482590 MESP2Q0VG99 397 aa8.83□□□□□ -1
CLK1-212ENST00000482590 PKN1Q16512 942 aa8.83□□□□□ -1
CLK1-212ENST00000482590 GRIN3AQ8TCU5 1115 aa8.83□□□□□ -1
CLK1-212ENST00000482590 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
CLK1-212ENST00000482590 NECAB3Q96P71 396 aaPredicted RBP8.83□□□□□ -1
CLK1-212ENST00000482590 KRTAP4-9Q9BYQ8 210 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms