RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 FLRT1Q9NZU1 646 aa19.54■□□□□ 0.72
VAMP4-204ENST00000482519 MKI67P46013 3256 aaKnown RBP19.53■□□□□ 0.72
VAMP4-204ENST00000482519 PCP11498 1178 aaKnown RBP19.53■□□□□ 0.72
VAMP4-204ENST00000482519 CCDC96Q2M329 555 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 RASGRP2Q7LDG7 609 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 RIOX2Q8IUF8 465 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 REPS2Q8NFH8 660 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 MMP19Q99542 508 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 ZKSCAN3Q9BRR0 538 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 TEX13BQ9BXU2 312 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 RAVER2Q9HCJ3 691 aaKnown RBP19.53■□□□□ 0.72
VAMP4-204ENST00000482519 SLC5A4Q9NY91 659 aa19.53■□□□□ 0.72
VAMP4-204ENST00000482519 ZNF214Q9UL59 606 aaPredicted RBP19.53■□□□□ 0.72
VAMP4-204ENST00000482519 COBLO75128 1261 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 FARP2O94887 1054 aaPredicted RBP19.52■□□□□ 0.72
VAMP4-204ENST00000482519 HOXC6P09630 235 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 TOP1P11387 765 aaKnown RBP19.52■□□□□ 0.72
VAMP4-204ENST00000482519 CCND3P30281 292 aaPredicted RBP19.52■□□□□ 0.72
VAMP4-204ENST00000482519 STAT2P52630 851 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 KCTD2Q14681 263 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 MAP3K21Q5TCX8 1036 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 CHURC1Q8WUH1 139 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 TMEM47Q9BQJ4 181 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 TCP11L1Q9NUJ3 509 aa19.52■□□□□ 0.72
VAMP4-204ENST00000482519 RAD50Q92878 1312 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 LAMA4Q16363 1823 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 KDM4AO75164 1064 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 PGK2P07205 417 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 CYP2C19P33261 490 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 RCSD1Q6JBY9 416 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 ABRAQ8N0Z2 381 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 SLC38A10Q9HBR0 1119 aa19.51■□□□□ 0.71
VAMP4-204ENST00000482519 ZNFX1Q9P2E3 1918 aaKnown RBP19.51■□□□□ 0.71
VAMP4-204ENST00000482519 B4E1Z4 1266 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 CNGA1P29973 690 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 COPB2P35606 906 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 FAM160B2Q86V87 743 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 CCDC136Q96JN2 1154 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 CRISPLD2Q9H0B8 497 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 RIPK3Q9Y572 518 aa19.5■□□□□ 0.71
VAMP4-204ENST00000482519 NOVP48745 357 aa19.49■□□□□ 0.71
VAMP4-204ENST00000482519 SNAP25P60880 206 aa19.49■□□□□ 0.71
VAMP4-204ENST00000482519 CCDC174Q6PII3 467 aa19.49■□□□□ 0.71
VAMP4-204ENST00000482519 DCAF4Q8WV16 495 aa19.49■□□□□ 0.71
VAMP4-204ENST00000482519 GPCPD1Q9NPB8 672 aa19.49■□□□□ 0.71
VAMP4-204ENST00000482519 HOMER2Q9NSB8 354 aa19.49■□□□□ 0.71
VAMP4-204ENST00000482519 FRMPD2Q68DX3 1309 aaPredicted RBP19.49■□□□□ 0.71
VAMP4-204ENST00000482519 ZNF236Q9UL36 1845 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 NEFLP07196 543 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 PTH1RQ03431 593 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 IQCA1Q86XH1 822 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 DPF3Q92784 378 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 DDX11Q96FC9 970 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 TTC14Q96N46 770 aa19.48■□□□□ 0.71
VAMP4-204ENST00000482519 ATP2A1O14983 1001 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 SGSM2O43147 1006 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 SLC16A2P36021 539 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 PRPF38BQ5VTL8 546 aaKnown RBP19.47■□□□□ 0.71
VAMP4-204ENST00000482519 OLFML2BQ68BL8 750 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 TTBK2Q6IQ55 1244 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 PAWRQ96IZ0 340 aaKnown RBP19.47■□□□□ 0.71
VAMP4-204ENST00000482519 MAML3Q96JK9 1138 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 AGBL1Q96MI9 1066 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 KRT23Q9C075 422 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 PRR12Q9ULL5 1215 aa19.47■□□□□ 0.71
VAMP4-204ENST00000482519 FDX1P10109 184 aa19.46■□□□□ 0.71
VAMP4-204ENST00000482519 OAZ1P54368 228 aa19.46■□□□□ 0.71
VAMP4-204ENST00000482519 UBE2Q1Q7Z7E8 422 aa19.46■□□□□ 0.71
VAMP4-204ENST00000482519 ANKRD35Q8N283 1001 aa19.46■□□□□ 0.71
VAMP4-204ENST00000482519 PIAS4Q8N2W9 510 aaPredicted RBP19.46■□□□□ 0.71
VAMP4-204ENST00000482519 DIS3LQ8TF46 1054 aaKnown RBP19.46■□□□□ 0.71
VAMP4-204ENST00000482519 ZSCAN10Q96SZ4 725 aaPredicted RBP19.46■□□□□ 0.71
VAMP4-204ENST00000482519 CNNM2Q9H8M5 875 aa19.46■□□□□ 0.71
VAMP4-204ENST00000482519 ZSWIM5Q9P217 1185 aa19.46■□□□□ 0.71
VAMP4-204ENST00000482519 U3KPZ7 1027 aaPredicted RBP19.46■□□□□ 0.71
VAMP4-204ENST00000482519 PLA2G6O60733 806 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 CAPN2P17655 700 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 TRDNQ13061 729 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 CCDC178Q5BJE1 867 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 PRAMEF19Q5SWL8 479 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 KIAA1211Q6ZU35 1233 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 DGKHQ86XP1 1220 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 TRPV1Q8NER1 839 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 UBAC1Q9BSL1 405 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 HTATIP2Q9BUP3 242 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 KAT14Q9H8E8 782 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 FBXO40Q9UH90 709 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 PLXNA1Q9UIW2 1896 aa19.45■□□□□ 0.7
VAMP4-204ENST00000482519 PDHBP11177 359 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 ALAS1P13196 640 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 NT5C2P49902 561 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 ZNF792Q3KQV3 632 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 LHX8Q68G74 356 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 NECAB2Q7Z6G3 386 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 ANKLE1Q8NAG6 615 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 CHST13Q8NET6 341 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 DDX20Q9UHI6 824 aaKnown RBP19.44■□□□□ 0.7
VAMP4-204ENST00000482519 OGDHLQ9ULD0 1010 aa19.44■□□□□ 0.7
VAMP4-204ENST00000482519 ZNF536O15090 1300 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms