RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CCDC171Q6TFL3 1326 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 SLC25A27O95847 323 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 SYN1P17600 705 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
CPSF4-212ENST00000482251 KCTD2Q14681 263 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 OLFML2BQ68BL8 750 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 SLFN13Q68D06 897 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 MAML3Q96JK9 1138 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
CPSF4-212ENST00000482251 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
CPSF4-212ENST00000482251 RIPK3Q9Y572 518 aa12.42□□□□□ -0.42
CPSF4-212ENST00000482251 ZNFX1Q9P2E3 1918 aaKnown RBP12.41□□□□□ -0.42
CPSF4-212ENST00000482251 FGAP02671 866 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 HSPD1P10809 573 aaKnown RBP12.41□□□□□ -0.42
CPSF4-212ENST00000482251 BMP3P12645 472 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 ABRAQ8N0Z2 381 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 TEX13BQ9BXU2 312 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 SLC5A4Q9NY91 659 aa12.41□□□□□ -0.42
CPSF4-212ENST00000482251 RANBP2P49792 3224 aaKnown RBP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 TRIOBPQ9H2D6 2365 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 LAMA4Q16363 1823 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 ZBED4O75132 1171 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 IGHA2P01877 340 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 TAL1P17542 331 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 CAPN2P17655 700 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 SDSP20132 328 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 MCCP23508 829 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 SLC1A4P43007 532 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 FXR1P51114 621 aaKnown RBP eCLIP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 SNAP25P60880 206 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 LRRC26Q2I0M4 334 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 CCDC96Q2M329 555 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 GJC2Q5T442 439 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 CWC27Q6UX04 472 aaKnown RBP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 KCTD1Q719H9 257 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 TBC1D10CQ8IV04 446 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 PRPF38AQ8NAV1 312 aaKnown RBP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 MKL1Q969V6 931 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 LENG1Q96BZ8 264 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-212ENST00000482251 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 FEM1BQ9UK73 627 aa12.4□□□□□ -0.42
CPSF4-212ENST00000482251 NEDD4P46934 1319 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 ORC4O43929 436 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 COL6A1P12109 1028 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 COPB2P35606 906 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 STAT2P52630 851 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 ATN1P54259 1190 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-212ENST00000482251 ALX1Q15699 326 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 ZNF792Q3KQV3 632 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 SENP6Q9GZR1 1112 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-212ENST00000482251 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 SLC38A10Q9HBR0 1119 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 SYNPO2Q9UMS6 1093 aa12.39□□□□□ -0.43
CPSF4-212ENST00000482251 SEPT4O43236 478 aa12.38□□□□□ -0.43
CPSF4-212ENST00000482251 MSCO60682 206 aa12.38□□□□□ -0.43
CPSF4-212ENST00000482251 PDE4AP27815 886 aa12.38□□□□□ -0.43
CPSF4-212ENST00000482251 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
CPSF4-212ENST00000482251 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
CPSF4-212ENST00000482251 GMCL1Q96IK5 515 aa12.38□□□□□ -0.43
CPSF4-212ENST00000482251 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-212ENST00000482251 DNM1LO00429 736 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 ANKRD35Q8N283 1001 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 ZKSCAN3Q9BRR0 538 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 TINF2Q9BSI4 451 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 IL25Q9H293 177 aa12.37□□□□□ -0.43
CPSF4-212ENST00000482251 ZHX1Q9UKY1 873 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-212ENST00000482251 MCM3APO60318 1980 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 ATP2A1O14983 1001 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 ALAS1P13196 640 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
CPSF4-212ENST00000482251 SLC16A2P36021 539 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
CPSF4-212ENST00000482251 PPP4R3BQ5MIZ7 849 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 TTBK2Q6IQ55 1244 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 MFSD6Q6ZSS7 791 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 FAM160B2Q86V87 743 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 FERMT2Q96AC1 680 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 RNF146Q9NTX7 359 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 ZNF536O15090 1300 aa12.36□□□□□ -0.43
CPSF4-212ENST00000482251 DNAH12Q6ZR08 3092 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 LAMA3Q16787 3333 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 DNAJC25-GNG10A0A024R161 153 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 PGK1P00558 417 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 FGRP09769 529 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 RARBP10826 455 aa12.35□□□□□ -0.43
CPSF4-212ENST00000482251 MAGEA10P43363 369 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms