RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 MCM3APO60318 1980 aa12.43□□□□□ -0.42
DDX39B-220ENST00000482195 CYP2D7A0A087X1C5 515 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 WDR46O15213 610 aaKnown RBP12.42□□□□□ -0.42
DDX39B-220ENST00000482195 PRKAB2O43741 272 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 RARBP10826 455 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 MAFAQ8NHW3 353 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-220ENST00000482195 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 CDX2Q99626 313 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-220ENST00000482195 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
DDX39B-220ENST00000482195 TCRBV5S4A2TA0A5A2 114 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
DDX39B-220ENST00000482195 SLC25A27O95847 323 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 PGK2P07205 417 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 VCANP13611 3396 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 KCTD2Q14681 263 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 IER5LQ5T953 404 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 ABRAQ8N0Z2 381 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 LENG1Q96BZ8 264 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-220ENST00000482195 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 RNPC3Q96LT9 517 aaKnown RBP12.41□□□□□ -0.42
DDX39B-220ENST00000482195 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.41□□□□□ -0.423e-10■□□□□ 10.7
DDX39B-220ENST00000482195 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 TMX2Q9Y320 296 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
DDX39B-220ENST00000482195 TRIM43BA6NCK2 446 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 HMMRO75330 724 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 PGK1P00558 417 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 IGHA2P01877 340 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 CLTBP09497 229 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 FOSL2P15408 326 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 CDK8P49336 464 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 TLE2Q04725 743 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 SNX17Q15036 470 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 RNF180Q86T96 592 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 GPIHBP1Q8IV16 184 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 PLPP6Q8IY26 295 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDX39B-220ENST00000482195 TRIM43Q96BQ3 446 aaPredicted RBP12.4□□□□□ -0.42
DDX39B-220ENST00000482195 BOLA2Q9H3K6 86 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 FBXO28Q9NVF7 368 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 GREB1LQ9C091 1923 aaPredicted RBP12.4□□□□□ -0.42
DDX39B-220ENST00000482195 MYO9BQ13459 2157 aa12.4□□□□□ -0.42
DDX39B-220ENST00000482195 A0A1W2PQ45 241 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-220ENST00000482195 A0A1W2PQY0 241 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 SMIM22K7EJ46 135 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 EEF2P13639 858 aaKnown RBP12.39□□□□□ -0.43
DDX39B-220ENST00000482195 RAG1P15918 1043 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 ADD2P35612 726 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 FAM83BQ5T0W9 1011 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 CCDC17Q96LX7 622 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 PHF24Q9UPV7 400 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 CTDP1Q9Y5B0 961 aaPredicted RBP12.39□□□□□ -0.43
DDX39B-220ENST00000482195 SLC4A4Q9Y6R1 1079 aa12.39□□□□□ -0.43
DDX39B-220ENST00000482195 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 USP17L21D6R901 530 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 AKR1A1P14550 325 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-220ENST00000482195 STAT3P40763 770 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
DDX39B-220ENST00000482195 C16orf86Q6ZW13 317 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 TINF2Q9BSI4 451 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 ZHX1Q9UKY1 873 aaPredicted RBP12.38□□□□□ -0.43
DDX39B-220ENST00000482195 PPP1R9AQ9ULJ8 1098 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 TACC3Q9Y6A5 838 aa12.38□□□□□ -0.43
DDX39B-220ENST00000482195 PRUNE2Q8WUY3 3088 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 VWA5AO00534 786 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 CHGBP05060 677 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 COPB2P35606 906 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 FPGSQ05932 587 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
DDX39B-220ENST00000482195 SIAH1Q8IUQ4 282 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 TTYH1Q9H313 450 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-220ENST00000482195 KANSL2Q9H9L4 492 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 STARD7Q9NQZ5 370 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
DDX39B-220ENST00000482195 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
DDX39B-220ENST00000482195 MS4A1P11836 297 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 ITGB8P26012 769 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 ZNF792Q3KQV3 632 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 C1orf53Q5VUE5 145 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 DDX11Q96FC9 970 aa12.36□□□□□ -0.43
DDX39B-220ENST00000482195 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms