RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 GRK4P32298 578 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 MFAP1P55081 439 aaKnown RBP3.8□□□□□ -1.8
USH2A-204ENST00000481786 CAMK2GQ13555 558 aaPredicted RBP3.8□□□□□ -1.8
USH2A-204ENST00000481786 TSNAXIP1Q2TAA8 658 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 ZNF746Q6NUN9 644 aaPredicted RBP3.8□□□□□ -1.8
USH2A-204ENST00000481786 CCDC84Q86UT8 332 aaPredicted RBP3.8□□□□□ -1.8
USH2A-204ENST00000481786 TSPYL5Q86VY4 417 aaPredicted RBP3.8□□□□□ -1.8
USH2A-204ENST00000481786 HID1Q8IV36 788 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 ADGRG2Q8IZP9 1017 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 LINC01356Q8N9X3 169 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 JARID2Q92833 1246 aaPredicted RBP3.8□□□□□ -1.8
USH2A-204ENST00000481786 PWWP2AQ96N64 755 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 TMEM74Q96NL1 305 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 G6PC3Q9BUM1 346 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 TACC3Q9Y6A5 838 aa3.8□□□□□ -1.8
USH2A-204ENST00000481786 POLA1P09884 1462 aaPredicted RBP3.79□□□□□ -1.8
USH2A-204ENST00000481786 SOGA1O94964 1423 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 FAM221AA4D161 298 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 FFAR3O14843 346 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 PF4P02776 101 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 CYP7A1P22680 504 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 LTKP29376 864 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 NCKAP1LP55160 1127 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 RPL6Q02878 288 aaKnown RBP3.79□□□□□ -1.8
USH2A-204ENST00000481786 LMNB2Q03252 620 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 LDLRAD1Q5T700 205 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 BNC2Q6ZN30 1099 aaPredicted RBP3.79□□□□□ -1.8
USH2A-204ENST00000481786 ERMP1Q7Z2K6 904 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 NLRX1Q86UT6 975 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 RELL1Q8IUW5 271 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 IGDCC3Q8IVU1 814 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 DNAJB8Q8NHS0 232 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 MZB1Q8WU39 189 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 LINC01599Q8WXQ3 324 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 RHOVQ96L33 236 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 SORCS2Q96PQ0 1159 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 MENTQ9BUN1 341 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 CEP170Q5SW79 1584 aa3.79□□□□□ -1.8
USH2A-204ENST00000481786 K7ESM1 405 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 USP2O75604 605 aaPredicted RBP3.78□□□□□ -1.8
USH2A-204ENST00000481786 F13A1P00488 732 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 SLPIP03973 132 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 GARTP22102 1010 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 GBP2P32456 591 aaPredicted RBP3.78□□□□□ -1.8
USH2A-204ENST00000481786 ADAM17P78536 824 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 TEKQ02763 1124 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 TRIM26Q12899 539 aaPredicted RBP3.78□□□□□ -1.8
USH2A-204ENST00000481786 PWP1Q13610 501 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 KIR3DS1Q14943 382 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 SNX17Q15036 470 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 GPR62Q9BZJ7 368 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 COPRSQ9NQ92 184 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 KBTBD4Q9NVX7 518 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 TJP2Q9UDY2 1190 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 RAD54L2Q9Y4B4 1467 aa3.78□□□□□ -1.8
USH2A-204ENST00000481786 A0A1B0GTL3 188 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 RBM47A0AV96 593 aaKnown RBP3.77□□□□□ -1.81
USH2A-204ENST00000481786 SHISA3A0PJX4 238 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 MINDY4BA8MYZ0 360 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 PGRP06401 933 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 MAGEA10P43363 369 aaPredicted RBP3.77□□□□□ -1.81
USH2A-204ENST00000481786 SLURP1P55000 103 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 FAM160A1Q05DH4 1040 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 SPPL2CQ8IUH8 684 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 MRPL41Q8IXM3 137 aaKnown RBP3.77□□□□□ -1.81
USH2A-204ENST00000481786 DTWD2Q8NBA8 298 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 GATAD2BQ8WXI9 593 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 DHX38Q92620 1227 aaKnown RBP3.77□□□□□ -1.81
USH2A-204ENST00000481786 TRIT1Q9H3H1 467 aaKnown RBP3.77□□□□□ -1.81
USH2A-204ENST00000481786 KCNQ5Q9NR82 932 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 SRRDQ9UH36 339 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 ADAM30Q9UKF2 790 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 CORINQ9Y5Q5 1042 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 DUSP10Q9Y6W6 482 aa3.77□□□□□ -1.81
USH2A-204ENST00000481786 PCF11O94913 1555 aaKnown RBP3.76□□□□□ -1.81
USH2A-204ENST00000481786 PRR36Q9H6K5 1346 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 GREM1O60565 184 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 BPNT1O95861 308 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 KCNC1P48547 511 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 HMGA2P52926 109 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 CHRNEQ04844 493 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 PDE4BQ07343 736 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 ZNF827Q17R98 1081 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 SLC6A19Q695T7 634 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 LDHDQ86WU2 507 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 MCATQ8IVS2 390 aaKnown RBP3.76□□□□□ -1.81
USH2A-204ENST00000481786 GOLM1Q8NBJ4 401 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 ACSF2Q96CM8 615 aaPredicted RBP3.76□□□□□ -1.81
USH2A-204ENST00000481786 TMEM87BQ96K49 555 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 COX4I2Q96KJ9 171 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 KRTAP3-1Q9BYR8 98 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 GPATCH2Q9NW75 528 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 NUP160Q12769 1436 aa3.76□□□□□ -1.81
USH2A-204ENST00000481786 WIZO95785 1651 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 PTPRMP28827 1452 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 GRIN2AQ12879 1464 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 SHROOM2Q13796 1616 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 PLCG1P19174 1290 aa3.75□□□□□ -1.81
USH2A-204ENST00000481786 EIF4A3P38919 411 aaKnown RBP3.75□□□□□ -1.81
USH2A-204ENST00000481786 YBX1P67809 324 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms