RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 TAOK1Q7L7X3 1001 aa12.71□□□□□ -0.38
TRIM27-205ENST00000481474 CERS3Q8IU89 383 aa12.71□□□□□ -0.38
TRIM27-205ENST00000481474 PBXIP1Q96AQ6 731 aa12.71□□□□□ -0.38
TRIM27-205ENST00000481474 RSRC1Q96IZ7 334 aaKnown RBP12.71□□□□□ -0.38
TRIM27-205ENST00000481474 SLC38A10Q9HBR0 1119 aa12.71□□□□□ -0.38
TRIM27-205ENST00000481474 CDV3Q9UKY7 258 aaKnown RBP12.71□□□□□ -0.38
TRIM27-205ENST00000481474 QTRT2Q9H974 415 aaKnown RBP12.7□□□□□ -0.38
TRIM27-205ENST00000481474 DNM3Q9UQ16 869 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 SERPINB6P35237 376 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
TRIM27-205ENST00000481474 GOLGA5Q8TBA6 731 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 PI4K2BQ8TCG2 481 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 RNF139Q8WU17 664 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 LRGUKQ96M69 825 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 PTPREP23469 700 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 PMLP29590 882 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 KCTD2Q14681 263 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 UBL4BQ8N7F7 174 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 RAD50Q92878 1312 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 KRT86O43790 486 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 ADCK2Q7Z695 626 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 DNAAF3Q8N9W5 541 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 PRKCQQ04759 706 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 DSTYKQ6XUX3 929 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 VSIG1Q86XK7 387 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.381e-8■■■■□ 21.6
TRIM27-205ENST00000481474 B4GALNT2Q8NHY0 566 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 FAM71BQ8TC56 605 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 DNAJC25Q9H1X3 360 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 SLC12A6Q9UHW9 1150 aa12.7□□□□□ -0.38
TRIM27-205ENST00000481474 DBN1Q16643 649 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 CWF19L2Q2TBE0 894 aaKnown RBP12.69□□□□□ -0.38
TRIM27-205ENST00000481474 GNPTABQ3T906 1256 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 SNX29Q8TEQ0 813 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
TRIM27-205ENST00000481474 TNNC1P63316 161 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 SCARA5Q6ZMJ2 495 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 CCDC26Q8TAB7 109 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 CTAGE1Q96RT6 745 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 CCPG1Q9ULG6 757 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
TRIM27-205ENST00000481474 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 CEP104O60308 925 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 SRGAP2CP0DJJ0 459 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 ANGPT1Q15389 498 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 PPWD1Q96BP3 646 aaKnown RBP12.69□□□□□ -0.38
TRIM27-205ENST00000481474 DYRK4Q9NR20 520 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 DENND3A2RUS2 1198 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 WDR64B1ANS9 1081 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 TTC19Q6DKK2 380 aaPredicted RBP12.69□□□□□ -0.38
TRIM27-205ENST00000481474 KRBA2Q6ZNG9 492 aa12.69□□□□□ -0.38
TRIM27-205ENST00000481474 ZMYND10O75800 440 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 TYRO3Q06418 890 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 CACNA2D3Q8IZS8 1091 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 MKL2Q9ULH7 1088 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 GTPBP6O43824 516 aaPredicted RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 ACTN1P12814 892 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 RFX3P48380 749 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 CALCRLQ16602 461 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 TMTC2Q8N394 836 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 TRIML2Q8N7C3 387 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 PTPN22Q9Y2R2 807 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 ZBTB7AO95365 584 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 NCOA5Q9HCD5 579 aaKnown RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 EEF1B2P24534 225 aaKnown RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 PDE6BP35913 854 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 HAUS8Q9BT25 410 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 PPARGC1AQ9UBK2 798 aaKnown RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 K7ENM7 598 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 RALGDSQ12967 914 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 DDX25Q9UHL0 483 aaKnown RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 SLMAPQ14BN4 828 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 BBS5Q8N3I7 341 aa12.68□□□□□ -0.38
TRIM27-205ENST00000481474 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
TRIM27-205ENST00000481474 CREB3O43889 395 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 WBP4O75554 376 aaKnown RBP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 EPB42P16452 691 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 RCN2Q14257 317 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 SUPT20HQ8NEM7 779 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 ATP6V0A1Q93050 837 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 LMNB1P20700 586 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 RXRBP28702 533 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 CDO1Q16878 200 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 NBPF10Q6P3W6 841 aaKnown RBP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 ZNF507Q8TCN5 953 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 GDAP1L1Q96MZ0 367 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 DPYDQ12882 1025 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 RFX6Q8HWS3 928 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 ABTB1Q969K4 478 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms