RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 IFI16Q16666 785 aaKnown RBP12.81□□□□□ -0.36
CUL3-209ENST00000481135 NKPD1Q17RQ9 610 aa12.81□□□□□ -0.36
CUL3-209ENST00000481135 THAP5Q7Z6K1 395 aa12.81□□□□□ -0.36
CUL3-209ENST00000481135 NLGN1Q8N2Q7 840 aa12.81□□□□□ -0.36
CUL3-209ENST00000481135 ZNF655Q8N720 491 aaPredicted RBP12.81□□□□□ -0.36
CUL3-209ENST00000481135 DAGLBQ8NCG7 672 aa12.81□□□□□ -0.36
CUL3-209ENST00000481135 SNX11Q9Y5W9 270 aa12.81□□□□□ -0.36
CUL3-209ENST00000481135 TMEM265A0A087WTH1 108 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 TRAV20A0A0B4J274 112 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 GSNP06396 782 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 SRFP11831 508 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 GRB10Q13322 594 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 SPACA3Q8IXA5 215 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 AARSD1Q9BTE6 412 aaKnown RBP12.8□□□□□ -0.36
CUL3-209ENST00000481135 ST14Q9Y5Y6 855 aa12.8□□□□□ -0.36
CUL3-209ENST00000481135 CDC45O75419 566 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 PPP2R2AP63151 447 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 POU4F1Q01851 419 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 TRIM59Q8IWR1 403 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 ZDHHC15Q96MV8 337 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 CDC6Q99741 560 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 HDAC8Q9BY41 377 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
CUL3-209ENST00000481135 TMEM260Q9NX78 707 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 PTCH2Q9Y6C5 1203 aa12.79□□□□□ -0.36
CUL3-209ENST00000481135 CCDC163A0A0D9SF12 145 aa12.78□□□□□ -0.36
CUL3-209ENST00000481135 KCNH1O95259 989 aa12.78□□□□□ -0.36
CUL3-209ENST00000481135 FAM153BP0C7A2 387 aa12.78□□□□□ -0.36
CUL3-209ENST00000481135 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
CUL3-209ENST00000481135 MRGPRX3Q96LB0 322 aa12.78□□□□□ -0.36
CUL3-209ENST00000481135 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
CUL3-209ENST00000481135 SHISA3A0PJX4 238 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 PRR19A6NJB7 356 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 MEIS1O00470 390 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 ADCY3O60266 1144 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 GRIK1P39086 918 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 AMPD2Q01433 879 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.37
CUL3-209ENST00000481135 HSPA12BQ96MM6 686 aa12.77□□□□□ -0.37
CUL3-209ENST00000481135 ESYT3A0FGR9 886 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 H3BS24 57 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
CUL3-209ENST00000481135 PLD6Q8N2A8 252 aaKnown RBP12.76□□□□□ -0.37
CUL3-209ENST00000481135 SYNPOQ8N3V7 929 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 CCDC140Q96MF4 163 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 ARHGEF4Q9NR80 690 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 ZSWIM5Q9P217 1185 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 U3KQE9 123 aa12.76□□□□□ -0.37
CUL3-209ENST00000481135 SSU72P8A0A1W2PR75 194 aa12.75□□□□□ -0.37
CUL3-209ENST00000481135 TPP2P29144 1249 aaPredicted RBP12.75□□□□□ -0.37
CUL3-209ENST00000481135 SQSTM1Q13501 440 aa12.75□□□□□ -0.37
CUL3-209ENST00000481135 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
CUL3-209ENST00000481135 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
CUL3-209ENST00000481135 ZC3H7BQ9UGR2 993 aaKnown RBP12.75□□□□□ -0.37
CUL3-209ENST00000481135 H0Y8X5 98 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 FGFR1P11362 822 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 PRSS36Q5K4E3 855 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 GTF2IRD2BQ6EKJ0 949 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 TMPRSS7Q7RTY8 843 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 GTF2IRD2Q86UP8 949 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 SCUBE1Q8IWY4 988 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 TCTN2Q96GX1 697 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 HRASLS5Q96KN8 279 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 SEMA6BQ9H3T3 888 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 KANSL2Q9H9L4 492 aa12.74□□□□□ -0.37
CUL3-209ENST00000481135 FURINP09958 794 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 HOXC12P31275 282 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 PCBP3P57721 371 aaKnown RBP12.73□□□□□ -0.37
CUL3-209ENST00000481135 EGFLAMQ63HQ2 1017 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 INTS5Q6P9B9 1019 aaKnown RBP12.73□□□□□ -0.37
CUL3-209ENST00000481135 BTN2A2Q8WVV5 523 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 ASB11Q8WXH4 323 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 LGR4Q9BXB1 951 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 SLKQ9H2G2 1235 aaPredicted RBP12.73□□□□□ -0.37
CUL3-209ENST00000481135 MINPP1Q9UNW1 487 aa12.73□□□□□ -0.37
CUL3-209ENST00000481135 BMP8BP34820 402 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 PLEKHG4Q58EX7 1191 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 NSMFQ6X4W1 530 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 C16orf86Q6ZW13 317 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 DHRS4Q9BTZ2 278 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 CYP26B1Q9NR63 512 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
CUL3-209ENST00000481135 TRBV23-1A0A0A0MS06 115 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 PRODHO43272 600 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 VAMP4O75379 141 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 TGFB1P01137 390 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 ENDOUP21128 410 aaKnown RBP12.71□□□□□ -0.37
CUL3-209ENST00000481135 TCEA2Q15560 299 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 CRTC3Q6UUV7 619 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 NKX2-4Q9H2Z4 354 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 SEMA3GQ9NS98 782 aa12.71□□□□□ -0.37
CUL3-209ENST00000481135 PITPNM2Q9BZ72 1349 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 CPP00450 1065 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 CD3EP07766 207 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 PABPC1P11940 636 aaKnown RBP12.7□□□□□ -0.38
CUL3-209ENST00000481135 LTKP29376 864 aa12.7□□□□□ -0.38
CUL3-209ENST00000481135 CTSKP43235 329 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms