RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 BHLHE41Q9C0J9 482 aaPredicted RBP8.22□□□□□ -1.09
VPS50-215ENST00000480943 OSGEPQ9NPF4 335 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 LMCD1Q9NZU5 365 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 ASAP1Q9ULH1 1129 aa8.22□□□□□ -1.09
VPS50-215ENST00000480943 MRC1P22897 1456 aa8.21□□□□□ -1.09
VPS50-215ENST00000480943 N4BP2Q86UW6 1770 aaPredicted RBP8.21□□□□□ -1.1
VPS50-215ENST00000480943 DDX3YO15523 660 aaKnown RBP8.21□□□□□ -1.1
VPS50-215ENST00000480943 DIAPH1O60610 1272 aaKnown RBP8.21□□□□□ -1.1
VPS50-215ENST00000480943 ADAM11O75078 769 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 NEFLP07196 543 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 HSP90AB1P08238 724 aaKnown RBP8.21□□□□□ -1.1
VPS50-215ENST00000480943 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
VPS50-215ENST00000480943 POLD1P28340 1107 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 LINC00116Q8NCU8 138 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 SYT17Q9BSW7 474 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 RUSC1Q9BVN2 902 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 FAM53CQ9NYF3 392 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 KIF13BQ9NQT8 1826 aa8.21□□□□□ -1.1
VPS50-215ENST00000480943 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 ERVV-2B6SEH9 535 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 ARL4DP49703 201 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 NLRP12P59046 1061 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 ITPK1Q13572 414 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 NFKBIBQ15653 356 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 SGO2Q562F6 1265 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 SMIM5Q71RC9 77 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 VN1R5Q7Z5H4 357 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 FAM129BQ96TA1 746 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
VPS50-215ENST00000480943 U2SURPO15042 1029 aaKnown RBP8.19□□□□□ -1.1
VPS50-215ENST00000480943 BRD1O95696 1058 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 TSPAN15O95858 294 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 HMGB2P26583 209 aaKnown RBP8.19□□□□□ -1.1
VPS50-215ENST00000480943 C19orf57Q0VDD7 668 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 IKBKEQ14164 716 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 DUSP27Q5VZP5 1158 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 GALNT12Q8IXK2 581 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 BRCA1P38398 1863 aaKnown RBP8.19□□□□□ -1.1
VPS50-215ENST00000480943 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
VPS50-215ENST00000480943 AFDNP55196 1824 aaKnown RBP8.18□□□□□ -1.1
VPS50-215ENST00000480943 LRRC10BA6NIK2 292 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 SOWAHDA6NJG2 315 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 CYP27A1Q02318 531 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 ORC1Q13415 861 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 AKAP4Q5JQC9 854 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 USPL1Q5W0Q7 1092 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 C1QL4Q86Z23 238 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 TBC1D32Q96NH3 1257 aa8.18□□□□□ -1.1
VPS50-215ENST00000480943 MEGF11A6BM72 1044 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 METTL12A8MUP2 240 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 RNMTO43148 476 aaKnown RBP8.17□□□□□ -1.1
VPS50-215ENST00000480943 YY1P25490 414 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 MTHFSDQ2M296 383 aaKnown RBP8.17□□□□□ -1.1
VPS50-215ENST00000480943 DBX2Q6ZNG2 339 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 CFAP53Q96M91 514 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 LIN7BQ9HAP6 207 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 RC3H2Q9HBD1 1191 aaKnown RBP8.17□□□□□ -1.1
VPS50-215ENST00000480943 LGR6Q9HBX8 967 aa8.17□□□□□ -1.1
VPS50-215ENST00000480943 GNEQ9Y223 722 aaKnown RBP8.17□□□□□ -1.1
VPS50-215ENST00000480943 A0A1W2PP55 124 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 LAMB4A4D0S4 1761 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 SOX1O00570 391 aaPredicted RBP8.16□□□□□ -1.1
VPS50-215ENST00000480943 GPR182O15218 404 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 CPNE3O75131 537 aaKnown RBP8.16□□□□□ -1.1
VPS50-215ENST00000480943 PPP2R1AP30153 589 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 SCN7AQ01118 1682 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 HGSNATQ68CP4 663 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 ZAR1Q86SH2 424 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 BCL7CQ8WUZ0 217 aaPredicted RBP8.16□□□□□ -1.1
VPS50-215ENST00000480943 YIPF2Q9BWQ6 316 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 SLC52A2Q9HAB3 445 aa8.16□□□□□ -1.1
VPS50-215ENST00000480943 BIN2Q9UBW5 565 aaPredicted RBP8.16□□□□□ -1.1
VPS50-215ENST00000480943 ZC3H7BQ9UGR2 993 aaKnown RBP8.16□□□□□ -1.1
VPS50-215ENST00000480943 CACNA1SQ13698 1873 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 BCORQ6W2J9 1755 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.1
VPS50-215ENST00000480943 CNTNAP4Q9C0A0 1308 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
VPS50-215ENST00000480943 CTSWP56202 376 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 DMRTB1Q96MA1 342 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 RBCK1Q9BYM8 510 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 SOX17Q9H6I2 414 aaPredicted RBP8.15□□□□□ -1.1
VPS50-215ENST00000480943 NPHS2Q9NP85 383 aa8.15□□□□□ -1.1
VPS50-215ENST00000480943 ARFGEF1Q9Y6D6 1849 aa8.15□□□□□ -1.11
VPS50-215ENST00000480943 UTRNP46939 3433 aa8.14□□□□□ -1.11
VPS50-215ENST00000480943 A0A096LPE4 126 aa8.14□□□□□ -1.11
VPS50-215ENST00000480943 A0A1W2PPZ6 126 aa8.14□□□□□ -1.11
VPS50-215ENST00000480943 IGHA2P01877 340 aa8.14□□□□□ -1.11
VPS50-215ENST00000480943 PRKAR2BP31323 418 aa8.14□□□□□ -1.11
VPS50-215ENST00000480943 CRKLP46109 303 aaKnown RBP8.14□□□□□ -1.11
VPS50-215ENST00000480943 SLC39A6Q13433 755 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms