RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 UBA5Q9GZZ9 404 aa19.5■□□□□ 0.71
SCAMP3-207ENST00000480219 TMOD4Q9NZQ9 345 aa19.5■□□□□ 0.71
SCAMP3-207ENST00000480219 RLFQ13129 1914 aa19.5■□□□□ 0.71
SCAMP3-207ENST00000480219 hCG_1984214I3L0E3 225 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 DTNBO60941 627 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 SCG2P13521 617 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 HOXA7P31268 230 aaPredicted RBP19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 HUNKP57058 714 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 AKAP17AQ02040 695 aaKnown RBP19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 DGKZQ13574 1117 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 CCDC82Q8N4S0 544 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 ZNF713Q8N859 430 aaPredicted RBP19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 RRP36Q96EU6 259 aaKnown RBP19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 CPVLQ9H3G5 476 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 RPAP3Q9H6T3 665 aaPredicted RBP19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 CHMP5Q9NZZ3 219 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 PRR12Q9ULL5 1215 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 MYH6P13533 1939 aa19.49■□□□□ 0.71
SCAMP3-207ENST00000480219 FDX1P10109 184 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 NUCB2P80303 420 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 SNAPC2Q13487 334 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 SPRYD7Q5W111 196 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 LARP1BQ659C4 914 aaKnown RBP19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 CATSPERGQ6ZRH7 1159 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 FBXO18Q8NFZ0 1043 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 MS4A4AQ96JQ5 239 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 ALG1Q9BT22 464 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 RANBP17Q9H2T7 1088 aaKnown RBP19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 SH3GLB2Q9NR46 395 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 ADAMTS5Q9UNA0 930 aa19.48■□□□□ 0.71
SCAMP3-207ENST00000480219 PNMA6FA0A0J9YX94 578 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L15C9J2P7 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L13C9JLJ4 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L11C9JVI0 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L18D6R9N7 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L22D6RA61 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L17D6RBQ6 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L19D6RCP7 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L20D6RJB6 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 ZBTB5O15062 677 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 STX6O43752 255 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 RAD21O60216 631 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 BRD1O95696 1058 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 SLC16A2P36021 539 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 USP17L24Q0WX57 530 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 FASTKD5Q7L8L6 764 aaKnown RBP19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 PIGSQ96S52 555 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 PPP1R9AQ9ULJ8 1098 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 MTMR6Q9Y217 621 aa19.47■□□□□ 0.71
SCAMP3-207ENST00000480219 TESPA1A2RU30 521 aaPredicted RBP19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 TMEM88BA6NKF7 163 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 PPFIA3O75145 1194 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 GTF2A2P52657 109 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 RASAL3Q86YV0 1011 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 C8orf76Q96K31 380 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 AIFM3Q96NN9 605 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 SLF1Q9BQI6 1058 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 BARHL2Q9NY43 387 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 AGTPBP1Q9UPW5 1226 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 SLC45A1Q9Y2W3 748 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 ZDHHC9Q9Y397 364 aa19.46■□□□□ 0.71
SCAMP3-207ENST00000480219 A0A0G2JMZ2 1700 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 SLC10A3P09131 477 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 GPAT2Q6NUI2 795 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 RGMBQ6NW40 437 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 PPP1R18Q6NYC8 613 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 LBX2Q6XYB7 198 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 TEX2Q8IWB9 1127 aa19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 SEC63Q9UGP8 760 aaKnown RBP19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 WDR33Q9C0J8 1336 aaKnown RBP19.45■□□□□ 0.7
SCAMP3-207ENST00000480219 BAZ2BQ9UIF8 2168 aaKnown RBP19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 hCG_1642624A0A1W2PR95 340 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 ESYT2A0FGR8 921 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 STXBP3O00186 592 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 CETPP11597 493 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 XBP1P17861 261 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 DSG3P32926 999 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 TRAF1Q13077 416 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 PKP1Q13835 747 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 COG2Q14746 738 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 CDC37Q16543 378 aaPredicted RBP19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 QRICH1Q2TAL8 776 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 TREML2Q5T2D2 321 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 WWC2Q6AWC2 1192 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 PHF20Q9BVI0 1012 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 TANGO6Q9C0B7 1094 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 SLC38A10Q9HBR0 1119 aa19.44■□□□□ 0.7
SCAMP3-207ENST00000480219 IKQ13123 557 aaPredicted RBP19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 NPY5RQ15761 445 aa19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 KRT40Q6A162 431 aa19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 TYW1BQ6NUM6 668 aa19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 REPS2Q8NFH8 660 aa19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 VAT1LQ9HCJ6 419 aa19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 PNMA2Q9UL42 364 aa19.43■□□□□ 0.7
SCAMP3-207ENST00000480219 FAM155AB1AL88 458 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms