RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 KLHL29Q96CT2 875 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 BICC1Q9H694 974 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 SERTAD1Q9UHV2 236 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 PNMA6EA0A0J9YXQ4 647 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 ARHGEF35A5YM69 484 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 B4E1Z4 1266 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 EXOC3O60645 756 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 MEX3CQ5U5Q3 659 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 CABP7Q86V35 215 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 ARHGEF25Q86VW2 580 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 EFHD1Q9BUP0 239 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 KRIT1O00522 736 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 RASIP1Q5U651 963 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 RRAGAQ7L523 313 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 SETDB2Q96T68 719 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 MRGBPQ9NV56 204 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 STOML1Q9UBI4 398 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 CTNND2Q9UQB3 1225 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 NOC2LQ9Y3T9 749 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 DZIP3Q86Y13 1208 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 HOMEZQ8IX15 550 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 KIRREL3Q8IZU9 778 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 NEK9Q8TD19 979 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 PPP1R13BQ96KQ4 1090 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 PDE11AQ9HCR9 933 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 NOP53Q9NZM5 478 aaKnown RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 TRPC6Q9Y210 931 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 TACC3Q9Y6A5 838 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 MGEA5O60502 916 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 TPD52P55327 224 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 MORC3Q14149 939 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 ZMYM1Q5SVZ6 1142 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 G2E3Q7L622 706 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 BLIDQ8IZY5 108 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 XAGE2Q96GT9 111 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 PYCARDQ9ULZ3 195 aa6.76□□□□□ -1.33
PRPF4B-205ENST00000480058 HSPA1LP34931 641 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 CLCN6P51797 869 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 ITIH3Q06033 890 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 CASP8Q14790 479 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 MUM1Q2TAK8 710 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 FBXO31Q5XUX0 539 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 MAP7D3Q8IWC1 876 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 CEP120Q8N960 986 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 CCDC17Q96LX7 622 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 OSBPL9Q96SU4 736 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 CFAP73A6NFT4 308 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 NR1I2O75469 434 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 PDIA3P30101 505 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 LRRC63Q05C16 580 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 BEND3Q5T5X7 828 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 LRCH2Q5VUJ6 765 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 FAM227BQ96M60 508 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 OR52Z1P0C646 297 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 RFC1P35251 1148 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 LIG3P49916 1009 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 ESRRGP62508 458 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 MKRN3Q13064 507 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 ALCAMQ13740 583 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 MUM1L1Q5H9M0 696 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 CDAN1Q8IWY9 1227 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 USHBP1Q8N6Y0 703 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 TRIM6Q9C030 488 aaPredicted RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 PPCSQ9HAB8 311 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 PODXLO00592 558 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 HSPD1P10809 573 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 SCG2P13521 617 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 GAP43P17677 238 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 HADHQ16836 314 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 DCUN1D2Q6PH85 259 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 PIK3AP1Q6ZUJ8 805 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 NSUN7Q8NE18 718 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 KDRP35968 1356 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 ABCC12Q96J65 1359 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 TARSL2A2RTX5 802 aaKnown RBP6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 ERVV-2B6SEH9 535 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 TIMM10P62072 90 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 NEK8Q86SG6 692 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 SLFN12Q8IYM2 578 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 MAGEB6Q8N7X4 407 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 GRAMD1AQ96CP6 724 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 TUBGCP2Q9BSJ2 902 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 PARD6BQ9BYG5 372 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 SCOCQ9UIL1 159 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 ITSN2Q9NZM3 1697 aa6.75□□□□□ -1.33
PRPF4B-205ENST00000480058 JAK2O60674 1132 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 ZWINTO95229 277 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PCCAP05165 728 aaPredicted RBP6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CPA1P15085 419 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 CAV1Q03135 178 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 ADCY2Q08462 1091 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 TCIRG1Q13488 830 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 C6orf118Q5T5N4 469 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 KRT26Q7Z3Y9 468 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 KLHL7Q8IXQ5 586 aa6.74□□□□□ -1.33
PRPF4B-205ENST00000480058 PPP4R1Q8TF05 950 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms