RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
CHD6-208ENST00000480022 ITGA6P23229 1130 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 NAP1L1P55209 391 aaKnown RBP12.17□□□□□ -0.46
CHD6-208ENST00000480022 SLC8A3P57103 927 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 NR1I3Q14994 352 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 ANO1Q5XXA6 986 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 PARP9Q8IXQ6 854 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
CHD6-208ENST00000480022 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
CHD6-208ENST00000480022 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
CHD6-208ENST00000480022 LAMB2P55268 1798 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
CHD6-208ENST00000480022 ZEB2O60315 1214 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 SRGNP10124 158 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 CHRNA5P30532 468 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 RBL2Q08999 1139 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 PDCLQ13371 301 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 DRP2Q13474 957 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 BRAPQ7Z569 592 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 C2CD5Q86YS7 1000 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 ACRBPQ8NEB7 543 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 ITFG2Q969R8 447 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 RPGRIP1Q96KN7 1286 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 RTL9Q8NET4 1388 aa12.17□□□□□ -0.46
CHD6-208ENST00000480022 GOLGA6L7A0A1B0GV03 622 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 ZMYND10O75800 440 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 CDC27P30260 824 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 GBP2P32456 591 aaPredicted RBP12.16□□□□□ -0.46
CHD6-208ENST00000480022 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
CHD6-208ENST00000480022 IFIT5Q13325 482 aaKnown RBP12.16□□□□□ -0.46
CHD6-208ENST00000480022 CCDC57Q2TAC2 916 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 RCSD1Q6JBY9 416 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
CHD6-208ENST00000480022 TRAPPC11Q7Z392 1133 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 CPLX3Q8WVH0 158 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 RPGRQ92834 1020 aaKnown RBP12.16□□□□□ -0.46
CHD6-208ENST00000480022 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 HPSEQ9Y251 543 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 CD2APQ9Y5K6 639 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 H0YIN7 160 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 ABL1P00519 1130 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 CYP21A2P08686 494 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 MYBL2P10244 700 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 PDHBP11177 359 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 NAA35Q5VZE5 725 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 RINLQ6ZS11 566 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 ENOX1Q8TC92 643 aaKnown RBP12.16□□□□□ -0.46
CHD6-208ENST00000480022 BOLA2Q9H3K6 86 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 PCDHA5Q9Y5H7 936 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 ANKRD31Q8N7Z5 1873 aa12.16□□□□□ -0.46
CHD6-208ENST00000480022 A0A1B0GTH6 734 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 ANKRD18BA2A2Z9 1011 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 EPB41P11171 864 aaKnown RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 SLC8A1P32418 973 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 METTL16Q86W50 562 aaKnown RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 KLHDC4Q8TBB5 520 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 MMS19Q96T76 1030 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 EME2A4GXA9 379 aaPredicted RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 MFAP3LO75121 409 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 SKAP2O75563 359 aaPredicted RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 NPR1P16066 1061 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 BMP6P22004 513 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 RWDD2BP57060 319 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 TGFB2P61812 414 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 CKAP4Q07065 602 aaKnown RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 OTUD7BQ6GQQ9 843 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 TSHZ1Q6ZSZ6 1077 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 MAB21L3Q8N8X9 362 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 CCDC26Q8TAB7 109 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 ZNF594Q96JF6 807 aaPredicted RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 C8orf76Q96K31 380 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 EPN3Q9H201 632 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 ACTR5Q9H9F9 607 aaPredicted RBP12.15□□□□□ -0.46
CHD6-208ENST00000480022 DACH1Q9UI36 760 aa12.15□□□□□ -0.46
CHD6-208ENST00000480022 DPEP1P16444 411 aa12.15□□□□□ -0.47
CHD6-208ENST00000480022 KCNA3P22001 575 aa12.15□□□□□ -0.47
CHD6-208ENST00000480022 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.47
CHD6-208ENST00000480022 SLC39A14Q15043 492 aa12.15□□□□□ -0.47
CHD6-208ENST00000480022 FAM228AQ86W67 206 aa12.15□□□□□ -0.47
CHD6-208ENST00000480022 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.47
CHD6-208ENST00000480022 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.47
CHD6-208ENST00000480022 AENQ8WTP8 325 aaKnown RBP12.15□□□□□ -0.47
CHD6-208ENST00000480022 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.47
CHD6-208ENST00000480022 RSRC1Q96IZ7 334 aaKnown RBP12.15□□□□□ -0.47
CHD6-208ENST00000480022 KIF9Q9HAQ2 790 aa12.15□□□□□ -0.47
CHD6-208ENST00000480022 PA2G4Q9UQ80 394 aaKnown RBP12.15□□□□□ -0.47
CHD6-208ENST00000480022 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms