RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 TRHRP34981 398 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-212ENST00000479958 MESP2Q0VG99 397 aa8.56□□□□□ -1.04
COMMD3-212ENST00000479958 FBXO15Q8NCQ5 510 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-212ENST00000479958 DIRC2Q96SL1 478 aa8.56□□□□□ -1.04
COMMD3-212ENST00000479958 PPP1R16BQ96T49 567 aa8.56□□□□□ -1.04
COMMD3-212ENST00000479958 SLC6A17Q9H1V8 727 aa8.56□□□□□ -1.04
COMMD3-212ENST00000479958 NSUN3Q9H649 340 aaKnown RBP8.56□□□□□ -1.04
COMMD3-212ENST00000479958 DCP1AQ9NPI6 582 aaPredicted RBP8.56□□□□□ -1.04
COMMD3-212ENST00000479958 KIR2DL1P43626 348 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-212ENST00000479958 KIR2DL2P43627 348 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-212ENST00000479958 GJA8P48165 433 aa8.55□□□□□ -1.04
COMMD3-212ENST00000479958 CCDC81Q6ZN84 652 aa8.55□□□□□ -1.04
COMMD3-212ENST00000479958 LSRQ86X29 649 aaPredicted RBP8.55□□□□□ -1.04
COMMD3-212ENST00000479958 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
COMMD3-212ENST00000479958 SRRTQ9BXP5 876 aaKnown RBP8.55□□□□□ -1.04
COMMD3-212ENST00000479958 CCSER2Q9H7U1 834 aa8.55□□□□□ -1.04
COMMD3-212ENST00000479958 GPR160Q9UJ42 338 aa8.55□□□□□ -1.04
COMMD3-212ENST00000479958 INPP5FQ9Y2H2 1132 aa8.55□□□□□ -1.04
COMMD3-212ENST00000479958 MEIS1O00470 390 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 FKTNO75072 461 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 GSNP06396 782 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 BMP8BP34820 402 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 CWF19L1Q69YN2 538 aaKnown RBP8.54□□□□□ -1.04
COMMD3-212ENST00000479958 RUFY4Q6ZNE9 571 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 RNF32Q9H0A6 362 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 EPB41L4BQ9H329 900 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 C9IYK1 514 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 GIPRP48546 466 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 SYDE1Q6ZW31 735 aaPredicted RBP8.54□□□□□ -1.04
COMMD3-212ENST00000479958 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 SP110Q9HB58 689 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 TNFRSF10DQ9UBN6 386 aa8.54□□□□□ -1.04
COMMD3-212ENST00000479958 TP53P04637 393 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-212ENST00000479958 NOP2P46087 812 aaKnown RBP8.53□□□□□ -1.04
COMMD3-212ENST00000479958 NASPP49321 788 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-212ENST00000479958 TDRD10Q5VZ19 366 aaKnown RBP8.53□□□□□ -1.04
COMMD3-212ENST00000479958 IRF2BP1Q8IU81 584 aa8.53□□□□□ -1.04
COMMD3-212ENST00000479958 MAP6Q96JE9 813 aa8.53□□□□□ -1.04
COMMD3-212ENST00000479958 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
COMMD3-212ENST00000479958 EBF1Q9UH73 591 aa8.53□□□□□ -1.04
COMMD3-212ENST00000479958 ZNF214Q9UL59 606 aaPredicted RBP8.53□□□□□ -1.04
COMMD3-212ENST00000479958 MINPP1Q9UNW1 487 aa8.53□□□□□ -1.04
COMMD3-212ENST00000479958 YBX2Q9Y2T7 364 aaKnown RBP8.53□□□□□ -1.04
COMMD3-212ENST00000479958 TMEM82A0PJX8 343 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 TMEM253P0C7T8 217 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 VAV1P15498 845 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 RAP1GAPP47736 663 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 ZYXQ15942 572 aaKnown RBP8.52□□□□□ -1.05
COMMD3-212ENST00000479958 ZNF124Q15973 351 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 CEP128Q6ZU80 1094 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 C19orf47Q8N9M1 422 aaKnown RBP8.52□□□□□ -1.05
COMMD3-212ENST00000479958 FCRL2Q96LA5 508 aaPredicted RBP8.52□□□□□ -1.05
COMMD3-212ENST00000479958 SLC26A8Q96RN1 970 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 CDADC1Q9BWV3 514 aa8.52□□□□□ -1.05
COMMD3-212ENST00000479958 PHAXQ9H814 394 aaKnown RBP8.52□□□□□ -1.05
COMMD3-212ENST00000479958 DBX1A6NMT0 343 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 NFIBO00712 420 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 ITGA4P13612 1032 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 CD247P20963 164 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 PPP2R5EQ16537 467 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 GNPTABQ3T906 1256 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
COMMD3-212ENST00000479958 ACBD3Q9H3P7 528 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 GP6Q9HCN6 339 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 STRIP2Q9ULQ0 834 aa8.51□□□□□ -1.05
COMMD3-212ENST00000479958 SF3B6Q9Y3B4 125 aaKnown RBP8.51□□□□□ -1.05
COMMD3-212ENST00000479958 A0A087WZG4 1122 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 NRDCO43847 1150 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 PSPNO60542 156 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 ZNF205O95201 554 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 PDE6BP35913 854 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 RTP1P59025 263 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 FZD5Q13467 585 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 TIGD5Q53EQ6 642 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 DCAF15Q66K64 600 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 KCNN1Q92952 543 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 INTS4Q96HW7 963 aaKnown RBP8.5□□□□□ -1.05
COMMD3-212ENST00000479958 FHOD1Q9Y613 1164 aa8.5□□□□□ -1.05
COMMD3-212ENST00000479958 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-212ENST00000479958 USP2O75604 605 aaPredicted RBP8.49□□□□□ -1.05
COMMD3-212ENST00000479958 CTSKP43235 329 aa8.49□□□□□ -1.05
COMMD3-212ENST00000479958 GNL2Q13823 731 aaKnown RBP8.49□□□□□ -1.05
COMMD3-212ENST00000479958 GALNT18Q6P9A2 607 aa8.49□□□□□ -1.05
COMMD3-212ENST00000479958 HHIPL1Q96JK4 782 aa8.49□□□□□ -1.05
COMMD3-212ENST00000479958 CRTAC1Q9NQ79 661 aa8.49□□□□□ -1.05
COMMD3-212ENST00000479958 FAM86C1Q9NVL1 165 aa8.49□□□□□ -1.05
COMMD3-212ENST00000479958 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
COMMD3-212ENST00000479958 ATAD2BQ9ULI0 1458 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 TOP2AP11388 1531 aaKnown RBP8.48□□□□□ -1.05
COMMD3-212ENST00000479958 KRTAP4-8A0A0G2JLE6 195 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 SHOXO15266 292 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 ERCC5P28715 1186 aaPredicted RBP8.48□□□□□ -1.05
COMMD3-212ENST00000479958 ZNF445P59923 1031 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 SLC7A5Q01650 507 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 CRTC3Q6UUV7 619 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 ZPBP2Q6X784 338 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
COMMD3-212ENST00000479958 BRF1Q92994 677 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms