RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
APTX-223ENST00000479656 STXBP3O00186 592 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 ADAMTS3O15072 1205 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 SPP2Q13103 211 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 DGKZQ13574 1117 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 NPY5RQ15761 445 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 MYSM1Q5VVJ2 828 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 FTOQ9C0B1 505 aaKnown RBP eCLIP12.91□□□□□ -0.34
APTX-223ENST00000479656 FOXP1Q9H334 677 aaPredicted RBP12.91□□□□□ -0.34
APTX-223ENST00000479656 ZHX2Q9Y6X8 837 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 TCHHQ07283 1943 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 PNMA6FA0A0J9YX94 578 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 KRT2P35908 639 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 SNAP25P60880 206 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 MAP1SQ66K74 1059 aaPredicted RBP12.91□□□□□ -0.34
APTX-223ENST00000479656 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
APTX-223ENST00000479656 COA7Q96BR5 231 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 MTMR8Q96EF0 704 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
APTX-223ENST00000479656 USP28Q96RU2 1077 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 WDR18Q9BV38 432 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 KIAA1683Q9H0B3 1180 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
APTX-223ENST00000479656 ZBTB5O15062 677 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 TRAK2O60296 914 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 GADD45BO75293 160 aaPredicted RBP12.9□□□□□ -0.34
APTX-223ENST00000479656 NF2P35240 595 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 NAPAP54920 295 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 MTMR2Q13614 643 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 NOL9Q5SY16 702 aaKnown RBP12.9□□□□□ -0.34
APTX-223ENST00000479656 SYDE2Q5VT97 1194 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 BTNL9Q6UXG8 535 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 NOSTRINQ8IVI9 506 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 AS3MTQ9HBK9 375 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 BRMS1Q9HCU9 246 aa12.9□□□□□ -0.34
APTX-223ENST00000479656 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 PPP1R11O60927 126 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 PTMSP20962 102 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 CALML3P27482 149 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 IREB2P48200 963 aaKnown RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 STAT2P52630 851 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.35
APTX-223ENST00000479656 VGLL4Q14135 290 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 TTLL12Q14166 644 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 EARS2Q5JPH6 523 aaKnown RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 ATL3Q6DD88 541 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 ZNF280CQ8ND82 737 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 LEO1Q8WVC0 666 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 SCAND2PQ9GZW5 306 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 EMILIN3Q9NT22 766 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 CLIC4Q9Y696 253 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 SMCO2A6NFE2 343 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 TRAF5O00463 557 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 BACE1P56817 501 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 CDC37Q16543 378 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 NOM1Q5C9Z4 860 aaKnown RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 BLIDQ8IZY5 108 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 CCDC12Q8WUD4 166 aaPredicted RBP12.89□□□□□ -0.35
APTX-223ENST00000479656 NMRK2Q9NPI5 230 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 PCDHA4Q9UN74 947 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
APTX-223ENST00000479656 DOCK1Q14185 1865 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 USP14P54578 494 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 CSPP1Q1MSJ5 1256 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
APTX-223ENST00000479656 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 LPAR1Q92633 364 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 TNFRSF25Q93038 417 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 ZMYND12Q9H0C1 365 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 RCOR1Q9UKL0 485 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 AFG3L2Q9Y4W6 797 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 CSADQ9Y600 493 aa12.88□□□□□ -0.35
APTX-223ENST00000479656 DDX49Q9Y6V7 483 aaKnown RBP12.88□□□□□ -0.35
APTX-223ENST00000479656 hCG_1984214I3L0E3 225 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
APTX-223ENST00000479656 GALNT17Q6IS24 598 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 ZNF713Q8N859 430 aaPredicted RBP12.87□□□□□ -0.35
APTX-223ENST00000479656 RASGRP4Q8TDF6 673 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 C6orf50Q9HD87 102 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 RTEL1Q9NZ71 1219 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 M0R2N6 131 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 WDR46O15213 610 aaKnown RBP12.87□□□□□ -0.35
APTX-223ENST00000479656 PLA2G6O60733 806 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 GNA11P29992 359 aa12.87□□□□□ -0.35
APTX-223ENST00000479656 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms