RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 BBS9Q3SYG4 887 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 PRAMEF13Q5VWM6 474 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 LARP1BQ659C4 914 aaKnown RBP8.41□□□□□ -1.06
SSR3-207ENST00000478842 ARMCX6Q7L4S7 300 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 CYB5D2Q8WUJ1 264 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 SLC9A7Q96T83 725 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 TNKS2Q9H2K2 1166 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 SEMA6CQ9H3T2 930 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 SLC52A1Q9NWF4 448 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 DAGLAQ9Y4D2 1042 aa8.41□□□□□ -1.06
SSR3-207ENST00000478842 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.06
SSR3-207ENST00000478842 PLEKHG1Q9ULL1 1385 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 UPK3BL1B0FP48 263 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 UPK3BL2E5RIL1 263 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 ACRP10323 421 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 UNC5AQ6ZN44 842 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 FAM20CQ8IXL6 584 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 CCDC113Q9H0I3 377 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 C19orf44Q9H6X5 657 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 STK17AQ9UEE5 414 aa8.4□□□□□ -1.06
SSR3-207ENST00000478842 CROCC2H7BZ55 1655 aa8.4□□□□□ -1.07
SSR3-207ENST00000478842 NOS1P29475 1434 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 KIF15Q9NS87 1388 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 DHX15O43143 795 aaKnown RBP8.39□□□□□ -1.07
SSR3-207ENST00000478842 NFICP08651 508 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 BMP3P12645 472 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 BMS1Q14692 1282 aaKnown RBP8.39□□□□□ -1.07
SSR3-207ENST00000478842 NCAPHQ15003 741 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 FBLIM1Q8WUP2 373 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 MEGF10Q96KG7 1140 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 SRPK1Q96SB4 655 aaKnown RBP8.39□□□□□ -1.07
SSR3-207ENST00000478842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.39□□□□□ -1.07
SSR3-207ENST00000478842 MSRB2Q9Y3D2 182 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 TBX22Q9Y458 520 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
SSR3-207ENST00000478842 FAM95CA0A1B0GW59 222 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
SSR3-207ENST00000478842 GBP1P32455 592 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 PAOXQ6QHF9 649 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 UBE3DQ7Z6J8 389 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 CELF2-AS1Q8N7Q2 184 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 GIMAP7Q8NHV1 300 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 DEPDC7Q96QD5 511 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 KIF2CQ99661 725 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 MAPK8IP1Q9UQF2 711 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 SRCAPQ6ZRS2 3230 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 MYO5BQ9ULV0 1848 aa8.38□□□□□ -1.07
SSR3-207ENST00000478842 ZFYVE9O95405 1425 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 PIK3R4Q99570 1358 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 AFF2P51816 1311 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 KRBA1A5PL33 1030 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 DDAH1O94760 285 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 ATF3P18847 181 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 RBM6P78332 1123 aaKnown RBP8.37□□□□□ -1.07
SSR3-207ENST00000478842 ARMC10Q8N2F6 343 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 DPH2Q9BQC3 489 aaPredicted RBP8.37□□□□□ -1.07
SSR3-207ENST00000478842 KCNF1Q9H3M0 494 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 PIF1Q9H611 641 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 ST7Q9NRC1 585 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 TMA7Q9Y2S6 64 aaKnown RBP8.37□□□□□ -1.07
SSR3-207ENST00000478842 RPRD2Q5VT52 1461 aaKnown RBP8.37□□□□□ -1.07
SSR3-207ENST00000478842 SETD5Q9C0A6 1442 aa8.37□□□□□ -1.07
SSR3-207ENST00000478842 CANXP27824 592 aaKnown RBP8.36□□□□□ -1.07
SSR3-207ENST00000478842 SLC7A5Q01650 507 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 RASA3Q14644 834 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 ZYXQ15942 572 aaKnown RBP8.36□□□□□ -1.07
SSR3-207ENST00000478842 ZNF746Q6NUN9 644 aaPredicted RBP8.36□□□□□ -1.07
SSR3-207ENST00000478842 VHLLQ6RSH7 139 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 CD163Q86VB7 1156 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 CLEC10AQ8IUN9 316 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 FAM178BQ8IXR5 827 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 SNTG2Q9NY99 539 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 ZNF214Q9UL59 606 aaPredicted RBP8.36□□□□□ -1.07
SSR3-207ENST00000478842 RGS12O14924 1447 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 DCCP43146 1447 aa8.36□□□□□ -1.07
SSR3-207ENST00000478842 PDPK1O15530 556 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 CLEC3AO75596 197 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 POLR2BP30876 1174 aaKnown RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 ETV3P41162 512 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 CHRNA4P43681 627 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 IFRD2Q12894 506 aaPredicted RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 RASGRF1Q13972 1273 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 C6orf15Q6UXA7 325 aaPredicted RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 BEND4Q6ZU67 534 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 BRINP3Q76B58 766 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSR3-207ENST00000478842 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 LRRC59Q96AG4 307 aaKnown RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 SLC6A18Q96N87 628 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 PSMG3-AS1Q96PY0 264 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
SSR3-207ENST00000478842 CEP131Q9UPN4 1083 aa8.35□□□□□ -1.07
SSR3-207ENST00000478842 TMEM131LA2VDJ0 1609 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms