RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 NAPBQ9H115 298 aa18.78■□□□□ 0.6
GARNL3-215ENST00000478702 MROH8Q9H579 483 aa18.78■□□□□ 0.6
GARNL3-215ENST00000478702 ARHGEF10LQ9HCE6 1279 aa18.78■□□□□ 0.6
GARNL3-215ENST00000478702 PRDM5Q9NQX1 630 aaPredicted RBP18.78■□□□□ 0.6
GARNL3-215ENST00000478702 PDLIM7Q9NR12 457 aa18.78■□□□□ 0.6
GARNL3-215ENST00000478702 PLIN4Q96Q06 1357 aa18.78■□□□□ 0.6
GARNL3-215ENST00000478702 TRIM43BA6NCK2 446 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 FLOT1O75955 427 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 NMIQ13287 307 aaPredicted RBP18.77■□□□□ 0.6
GARNL3-215ENST00000478702 TMEM132BQ14DG7 1078 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 FERMT2Q96AC1 680 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 TRIM43Q96BQ3 446 aaPredicted RBP18.77■□□□□ 0.6
GARNL3-215ENST00000478702 SH2D4AQ9H788 454 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 VCPKMTQ9H867 229 aa18.77■□□□□ 0.6
GARNL3-215ENST00000478702 ZMYM6O95789 1325 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 MYCNP04198 464 aaPredicted RBP18.76■□□□□ 0.59
GARNL3-215ENST00000478702 PPARAQ07869 468 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 MCMDC2Q4G0Z9 681 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 VPS53Q5VIR6 699 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 C1orf53Q5VUE5 145 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 CDX2Q99626 313 aaPredicted RBP18.76■□□□□ 0.59
GARNL3-215ENST00000478702 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.76■□□□□ 0.59
GARNL3-215ENST00000478702 ADAMTS5Q9UNA0 930 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 PRUNE2Q8WUY3 3088 aa18.76■□□□□ 0.59
GARNL3-215ENST00000478702 SPTBN5Q9NRC6 3674 aaKnown RBP18.76■□□□□ 0.59
GARNL3-215ENST00000478702 CCDC171Q6TFL3 1326 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 ITGB8P26012 769 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 ZNF589Q86UQ0 364 aaPredicted RBP18.75■□□□□ 0.59
GARNL3-215ENST00000478702 STK11IPQ8N1F8 1099 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 TTYH1Q9H313 450 aaPredicted RBP18.75■□□□□ 0.59
GARNL3-215ENST00000478702 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 KANSL2Q9H9L4 492 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 MKNK2Q9HBH9 465 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 ZNF287Q9HBT7 754 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 SLC5A4Q9NY91 659 aa18.75■□□□□ 0.59
GARNL3-215ENST00000478702 WDR46O15213 610 aaKnown RBP18.74■□□□□ 0.59
GARNL3-215ENST00000478702 FCER1AP12319 257 aa18.74■□□□□ 0.59
GARNL3-215ENST00000478702 SDSP20132 328 aa18.74■□□□□ 0.59
GARNL3-215ENST00000478702 SAMD1Q6SPF0 538 aaPredicted RBP18.74■□□□□ 0.59
GARNL3-215ENST00000478702 FBXO28Q9NVF7 368 aa18.74■□□□□ 0.59
GARNL3-215ENST00000478702 PHF24Q9UPV7 400 aa18.74■□□□□ 0.59
GARNL3-215ENST00000478702 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 PRDM1O75626 825 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 SLC25A27O95847 323 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 PGK2P07205 417 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
GARNL3-215ENST00000478702 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
GARNL3-215ENST00000478702 TAL1P17542 331 aaPredicted RBP18.73■□□□□ 0.59
GARNL3-215ENST00000478702 TLE2Q04725 743 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 PDE4BQ07343 736 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 ALX1Q15699 326 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 TTC22Q5TAA0 569 aa18.73■□□□□ 0.59
GARNL3-215ENST00000478702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
GARNL3-215ENST00000478702 GBF1Q92538 1859 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
GARNL3-215ENST00000478702 EPHB4P54760 987 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 SMAD3P84022 425 aaKnown RBP18.72■□□□□ 0.59
GARNL3-215ENST00000478702 ZNF792Q3KQV3 632 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 RIOX2Q8IUF8 465 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 MMP19Q99542 508 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 XPNPEP3Q9NQH7 507 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 DIAPH3Q9NSV4 1193 aa18.72■□□□□ 0.59
GARNL3-215ENST00000478702 HIP1O00291 1037 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 PGK1P00558 417 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 ZNF865P0CJ78 1059 aaPredicted RBP18.71■□□□□ 0.59
GARNL3-215ENST00000478702 HSPD1P10809 573 aaKnown RBP18.71■□□□□ 0.59
GARNL3-215ENST00000478702 MFAP1P55081 439 aaKnown RBP18.71■□□□□ 0.59
GARNL3-215ENST00000478702 MYLIPQ8WY64 445 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 TINF2Q9BSI4 451 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 NYAP2Q9P242 653 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 NRBP1Q9UHY1 535 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 ANAPC4Q9UJX5 808 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 ZNF214Q9UL59 606 aaPredicted RBP18.71■□□□□ 0.59
GARNL3-215ENST00000478702 MYO9BQ13459 2157 aa18.71■□□□□ 0.59
GARNL3-215ENST00000478702 VWA5AO00534 786 aa18.7■□□□□ 0.58
GARNL3-215ENST00000478702 RARBP10826 455 aa18.7■□□□□ 0.58
GARNL3-215ENST00000478702 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
GARNL3-215ENST00000478702 MAFAQ8NHW3 353 aaPredicted RBP18.7■□□□□ 0.58
GARNL3-215ENST00000478702 LENG1Q96BZ8 264 aaPredicted RBP18.7■□□□□ 0.58
GARNL3-215ENST00000478702 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
GARNL3-215ENST00000478702 PPP1R9AQ9ULJ8 1098 aa18.7■□□□□ 0.58
GARNL3-215ENST00000478702 DIS3Q9Y2L1 958 aaKnown RBP18.7■□□□□ 0.58
GARNL3-215ENST00000478702 TACC3Q9Y6A5 838 aa18.7■□□□□ 0.58
GARNL3-215ENST00000478702 A0A1W2PQ45 241 aaPredicted RBP18.69■□□□□ 0.58
GARNL3-215ENST00000478702 A0A1W2PQY0 241 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 ADAMTS4O75173 837 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 CLTBP09497 229 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 STAT3P40763 770 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 CTDSPL2Q05D32 466 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 NEDD1Q8NHV4 660 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 CEP95Q96GE4 821 aa18.69■□□□□ 0.58
GARNL3-215ENST00000478702 KIAA0355O15063 1070 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 FGAP02671 866 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 TSPY3P0CV98 308 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 TSPY8P0CW00 308 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 KCTD2Q14681 263 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 FAM83BQ5T0W9 1011 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms